Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4740g00009 ATGGATGACCAACCCTTCCAGAGACTCCTCTTCGCCGTCTTCGAACAGTTATTCTTCCTCATCATACTTGCCGCTGTGATTTGGCAACTTTATTGTTGCTTTTATCACATCCGCCTCCGCCTTCGCCGCCGCCGAGATGGCAGCCTTTCCCCTTCCGGTGACATTCCCCGCCCTCCTCCTCCAGCCCATAATAGTCCCCTCCATCCTTCACTTTTCCAGTTCCTTCCCACTTTCACCTACTCCTCCTCCACCGCCGACGCAGACAAGCACAGTCACCCTTTGCCGCAGTGTGCCGTCTGCTTGAGCGAGTTCGAAGAAGGCCAAACAGGGCGAGTGCTCCCGAACTGCGACCATTTCTTTCACCGCGATTGCATCGACGGGTGGCTCCGAGAACACTCGACTTGTCCGTTGTGCCGAAAAGTCGTCAAACCGAAGCCGAGAATCGCGTCACAGCATGTAAATACAGAAACGTCTGCTGCCGAAGAAGGTGAGTTAGAGAATTCGTCGAGCGTAAATCTTCCTCCGCCACTTAGGTGTCCCAAAAAGACGTGGCAGGTGACGGAATTAGAAGGATTGGTGATAGAGATTCCTGAGGAAGACCATCACCGGAGGCGAAGCCAGTCGAGGAGTGGTTCGGAGAGTTTTCAACTATAA 654 0.5352 MDDQPFQRLLFAVFEQLFFLIILAAVIWQLYCCFYHIRLRLRRRRDGSLSPSGDIPRPPPPAHNSPLHPSLFQFLPTFTYSSSTADADKHSHPLPQCAVCLSEFEEGQTGRVLPNCDHFFHRDCIDGWLREHSTCPLCRKVVKPKPRIASQHVNTETSAAEEGELENSSSVNLPPPLRCPKKTWQVTELEGLVIEIPEEDHHRRRSQSRSGSESFQL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4740g00009 217 CDD RING-H2_EL5-like 96 139 - -
Pral4740g00009 217 Pfam Ring finger domain 96 139 IPR001841 -
Pral4740g00009 217 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Pral4740g00009 217 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 19 166 - -
Pral4740g00009 217 SMART ring_2 97 138 IPR001841 -
Pral4740g00009 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 145 IPR013083 -
Pral4740g00009 217 MobiDBLite consensus disorder prediction 148 176 - -
Pral4740g00009 217 MobiDBLite consensus disorder prediction 150 174 - -
Pral4740g00009 217 SUPERFAMILY RING/U-box 96 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4740g00009 Pral-Chr4740 54287 55036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4740g00009 8 165 Rapid Response to Elicitors AT3G16720 41.566 7.51e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4740g00009 - - pcin:129307892 211.075