Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4738g00002 ATGGCGATGGCTGCTCTGCGACGGGAAGGGAGGCGTCTAGCCCCTCTCATCTCTCCACAACCGTTGACCGCTCTCCGATCTTCCCTCATCTCTGAGGAGCAAGTCCCCCAGGGAGTGCGCTCTATTTCAACTCAAGTAGTCAGAAATCGGATGAAGAGTGTGAAGAATATCCAGAAAATTACAAAGGCAATGAAGATGGTTGCAGCTTCAAAACTGCGTGCTATTCAAACTAGAGCTGAAAATTCTCGTGGCCTATGGCAGCCATTTACTGCACTTCTGGGTGACACTCCCAGTGTTGATGTGAAGAAGAATGTTATTATTACTGTTTCTTCTGACAAAGGTCTATGTGGTGGAATCAATTCTACCGCTGTCAAGATAAGCAGGGCTGTGCACAAACTAAATTCTGGGCCTGATAAAGAGACAAAGTATGTTATTTTGGGAGAGAAAGCTAAGGCTCAATTGGTACGTGACTCAAAGCAAGACATTGAGATCATCTTAACTGAGCTGCAGAAAAATCCCCTAAATTATACCCAGGTCTCTGTCCTCGCTGATGATATCTTAAAGAATGTGGAGTTTGATGCCTTGAGGATTATTTTCAACAAGTTCCAATCAGTTGTCTCATTTTTGCCAACTATGTCAACTGTATTATCTCCTGAGATTGTGGAGAGAGAGACTGAATCTGGGGGAAAGCTTGGAGAATTGGACTCTTATGAGGTGGAAGGTGGCGAAACAAAATCAGAAATACTTCAAAATCTGGCTGAGTTCCAGTTTTCTTGTGTCCTGTTCAATGCGGTATTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGGATGTCTGCCATGGACAGTTCTAGCAGAAATGCTGGGGAGATGCTTGACCGCCTCACCCTCACTTATAACAGAACACGTCAAGCTTCCATTACCACTGAATTGATTGAGATTATCTCAGGAGCATCAGCTCTAGAAGGTTGA 969 0.4448 MAMAALRREGRRLAPLISPQPLTALRSSLISEEQVPQGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITVSSDKGLCGGINSTAVKISRAVHKLNSGPDKETKYVILGEKAKAQLVRDSKQDIEIILTELQKNPLNYTQVSVLADDILKNVEFDALRIIFNKFQSVVSFLPTMSTVLSPEIVERETESGGKLGELDSYEVEGGETKSEILQNLAEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4738g00002 322 NCBIfam ATP synthase F1 subunit gamma 43 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 44 320 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 Hamap ATP synthase gamma chain [atpG]. 41 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 FunFam ATP synthase gamma chain 275 317 - -
Pral4738g00002 322 ProSitePatterns ATP synthase gamma subunit signature. 306 319 IPR023632 -
Pral4738g00002 322 PRINTS ATP synthase gamma subunit signature 193 210 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 PRINTS ATP synthase gamma subunit signature 101 120 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 PRINTS ATP synthase gamma subunit signature 267 286 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 PRINTS ATP synthase gamma subunit signature 298 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 PIRSF ATP_synthase_gamma 10 320 - -
Pral4738g00002 322 PANTHER ATP SYNTHASE GAMMA CHAIN 30 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 FunFam ATP synthase subunit gamma 67 279 - -
Pral4738g00002 322 Gene3D - 67 279 - -
Pral4738g00002 322 CDD F1-ATPase_gamma 43 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 Pfam ATP synthase 45 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pral4738g00002 322 Gene3D ATP synthase, gamma subunit, helix hairpin domain 47 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4738g00002 Pral-Chr4738 11472 16710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4738g00002 12 320 Primary Pumps ATPases AT1G15700 29.722 2.22e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4738g00002 K02136 - qsa:O6P43_002215 575.859