Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4737g00039 ATGGGTGGTGGGGAGAAGGAGCAAAGAACAATACCCTTGGAGATTGCAATTCAGAAGGAGCTGATATATCGGAGGAAGGTCACTTCATCCTCAATTCAAACTCTCCAGCAATCGCCATTATCAAGCCTTCTAAGTTCAAGTCCATGCCTTTCAGGTACCAAGCGAAAAGAACTAGTCAATCCACATGATCTGCCACTAGAATGTCAGAACCCAGATAAGTTATACTGCAAAATCTGCGAATTGTCATGCTCAAGTCCCTTCAATCTAACACAACACTTGATGGGTCGAAAGCACAAGTCAAAGCTAAAAGAGCAAGATTCGGAACATCATCAGAAGAAAGGAATGGAGGGGAGAAGGAATCAAATGAAATGGTGTGACCTGTGTAAAGTTCCATGCATGACTGAAGACTTGCTCAATCTGCACTTTAAGGGTAAAAAGCATAGGGCTGAACTACAGAAGTTTGAAATGAGCAAGGAAAAAGGTGGAGAGATCCCTAGTCAGAGAAAATGGTGTGAGCTATGCAAAATATGGTGCATTGATATGTCTGCTTTCAAGCAGCATCTTGAAGGCAAAAAGCACCTGTTCCAAATGCATATTATGGAGAAGAATAAGGAACGTCCTGATATGTTGCGGCCAAATTCCATTCGGTCCCACGCTGATGAGATGGTGAACGAGGCTAGAAATATGGACCAAGCACAATATGCTTTGCGGAGGAGTACCAGAGTACGGGAGAAGTCATTTAAGTCCAGAGATTAA 756 0.4299 MGGGEKEQRTIPLEIAIQKELIYRRKVTSSSIQTLQQSPLSSLLSSSPCLSGTKRKELVNPHDLPLECQNPDKLYCKICELSCSSPFNLTQHLMGRKHKSKLKEQDSEHHQKKGMEGRRNQMKWCDLCKVPCMTEDLLNLHFKGKKHRAELQKFEMSKEKGGEIPSQRKWCELCKIWCIDMSAFKQHLEGKKHLFQMHIMEKNKERPDMLRPNSIRSHADEMVNEARNMDQAQYALRRSTRVREKSFKSRD 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4737g00039 251 MobiDBLite consensus disorder prediction 95 116 - -
Pral4737g00039 251 Pfam Zinc-finger of C2H2 type 74 98 - -
Pral4737g00039 251 Pfam Zinc-finger of C2H2 type 124 147 - -
Pral4737g00039 251 Pfam Zinc-finger of C2H2 type 170 193 - -
Pral4737g00039 251 SMART ZnF_U1_5 166 200 IPR003604 GO:0003676|GO:0008270
Pral4737g00039 251 SMART ZnF_U1_5 120 154 IPR003604 GO:0003676|GO:0008270
Pral4737g00039 251 SMART ZnF_U1_5 71 105 IPR003604 GO:0003676|GO:0008270
Pral4737g00039 251 Gene3D Classic Zinc Finger 65 105 - -
Pral4737g00039 251 Gene3D Classic Zinc Finger 106 152 - -
Pral4737g00039 251 Gene3D Classic Zinc Finger 153 198 - -
Pral4737g00039 251 SUPERFAMILY beta-beta-alpha zinc fingers 154 197 IPR036236 -
Pral4737g00039 251 PANTHER ZINC FINGER RNA-BINDING PROTEIN 108 229 - -
Pral4737g00039 251 SUPERFAMILY beta-beta-alpha zinc fingers 114 156 IPR036236 -
Pral4737g00039 251 SUPERFAMILY beta-beta-alpha zinc fingers 71 108 IPR036236 -
Pral4737g00039 251 SMART c2h2final6 123 147 IPR013087 -
Pral4737g00039 251 SMART c2h2final6 74 98 IPR013087 -
Pral4737g00039 251 SMART c2h2final6 169 193 IPR013087 -
Pral4737g00039 251 MobiDBLite consensus disorder prediction 99 116 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral4737g00039 zf-met 7.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4737g00039 - - aip:107619886 193.356