Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4737g00038 ATGTCAGAGCAGGAAACCCACTCACGGGGCTTCATGATCGTCTGTTTCTTAGTCCTTTTTTCTGCAGGTAAAATCGCTGCCCAAGATATTCTGGACACAGAGAGACAAATTCTGCTGGAGCTGAGAACTCATCTGGATAATCAAACTCGAACAGATCGAGGAAGATACAGACTCTGGAACGCGAACAGCACAAGTCTATGTGAATGGCCAGGAATTTCATGCAGCCATACGGGGACAACCTCGGCGGCGAGAGTGGTCGGCATAGACCTTTCCGACAGCAGCATCGCTGGCGAGATTTTCCAGAATTTCTCGCAGCTTACCGAGCTCACGCACCTTGACCTTTCCACGAACACCATCACCGGAGAAATCCCAGCGGATCTAAGGCGATGCAGTAACCTCGTACATCTCAATCTCTCCCATAATCTTCTCGAGGGGGAGATAGATTTAACTGGATTGACGAGGTTAGAGACGCTGGACTTGTCGGGAAACAGGCTTCATGGGGATATAGGATTGAATTTTCCTGCCATTTGTGATAACTTAGTTACTTTGAATGTTTCTGGGAATAACTTCACTGGTTCGATCGATCATTGTTTCGATCAGTGCTTAAAATTGCAGTACTTGGATTTGAGCACCAACAATCTCAGTGGGAGTATTTGGATGGGATTTGCGAGGCTGAAGGAGTTTTCAGTTTCAGAGAACTATCTCACTGGTCCCCTGTATGAACAAGCATTCCCAGAAAACTGTAACCTCGAAGTACTCGATGTTTCATACAATGGGTTTACAGGAAATGCACCGAAGAATGTCAGTAAATGTAAGAATCTAGCGATTCTCAATCTTTCAAGTAACAAATTTTCTGGGGATATCCCCGTTGAATTGGGATCCATCTCAGGCCTCCAAGCATTGTACTTAGCCAACAATACATTTTCAAGAAGCATCCCAGAGACACTTTTAAACTTGACAACTCTAAATTTCTTGGATTTGAGCGGAAACGGTTTTGGGGGGGAGATACAAGACACACTAGGGAAGCTCAAGCAAGTGAAGTTCCTCCTCTCGTATTCAAATGCTTACACAGGAGGATTAAATTCATCGGGGATTCTCAAATTACCCAACATCTCTCGCTTAGACCTTAGTAACAACAGTTTTTCAGGTCCATTACCTATTGAAATCTCTAGGATGACTTCTCTGAAGTTCTTAATGTTGGCCTATAATCAATTCACCGGTACTATTCCTGCTGAGTTTGGAAATTTGGCTCAGCTTCAAGCACTTGATATCTCTTTCAACAATTTAACAGGGCCAATCCCACCAAGCCTGGGAAACTTGAGTTCTCTCTTATGGTTAATGCTTGCGAACAATTCATTGACCGGAGAAATCCCAAAAGAGCTCGGAAAATGCACAAGCCTGCTGTGGCTAAACCTTGAAAACAATAATCTCACTGGGAATTTCCCTCCTGAATTGACCAACATTGGAAGAAACGCCACGGCCACGTTCGAATTGAATCGAAATGAAGTCAATGGAATCCCTGCCGGTTCTGTTGAATGTTTGGCAATGAAGAGATGGATACCTGCCGATTACCCTCCTTTTAGCTTTGTGTACAGCATCCTCACAAGGAAAAATTGCATAAGCATTTGGGATAGATTACTCAAAGGGTATGGAATTTTCCCGATTTGCTCATCAGGTTCCTTTTTTCGTTTAAAGGAGATTTCTGGGTATGTGCAGTTAAGCGGGAATAATCTCATCGGAGAAGTTCCTTCAGAAATTGGGAACATGCAAAATTTCAGCATGCTGCACTTGGGGTTGAACAAATTTTCCGGGAAAATCCCTGCGGTGATAGGAGATCTGCCACTTGTGGTGTTGAACATAACAAGAAACAACTTTTCAGGTGAGATTCCATGGGACATTGGAAACCTTAAATGTCTTCGGAATCTGGATTTGTCCTACAACAATTTCTCTGGGACATTCCCGACAAGCTTGAACAACTTGACAGAGCTCAGTAAATTCAACATTTCTTACAACGCCTTTATTTCTGGGACAATCCCACCAACAGGACAATTAGCCACATTCGATAAAGATTCGTATTTGGGAGACCCACTCTTGACCCTACCAAGCTTCATCGATAGCGTTCCAGACGACACAGAAAACACGACCTCTCGCAGAGACCACGAAATCAGAAACAGAAACCCCAAGAAACTGTCAATGTTCTTGGCGTTTCTAGCTGTCACACTCGCTCTATTGGTATTCGGGCTCCTCTCTTTCATATTATGTTCATTAGCGAAAACCCGTTCACACGACCCAGAAGGATACCTATTGGAAGACACAAAAAACCAACATAACTCCGACAATTCGTCACGATGGTCGTCTGAACTAATTAAGGTTATCCATTTGAACAAGATAGCATTCACGCACGACGACATTCTCAAAGCCACCGGAAACTTCTCTGACAACAGAGTCATAGGAAAAGGCGGTTTTGGCACCGTGTACAGAGGAGTATTCCCCGACGGAATAGAAGTCGCAGTGAAGAAGCTTCAAAGGGAAGGGCTGGAAGGAGAAAGAGAGTTCAGAGCAGAAATGGAGGTTCTAAGCGGATACGGCTTCGGGTGGCCACACCCGAATTTAGTCACGCTATACGGGTGGTGCCTAAACGGGTCGGAGAAAATCCTAGTTTACGAATACATGGAAGGAGGAAGCTTGGAAGATGTTGTTACAGACCGAACAAGACTCACGTGGAAGAGAAGGCTAGAGATCGCCATTGACGTGGCTCGAGCATTGGTCTATTTGCACCATGAATGCTTCCCTCCAATTGTTCACAGAGACGTCAAGGCTAGCAACGTGCTCTTGGATAAACACGGGAAGGCTAAAGTCACAGACTTCGGGCTAGCAAGAGTGGTAGAAAATGGAGTGAGTCACGTGACCACCATGGTCGCCGGGACGGTGGGCTACGTGGCACCTGAGTATGGTCAGACATGGAAGGCGACAACGAAAGGTGATGTGTACAGCTTTGGAGTGGTGGCTATGGAGTTAGCCACCGGGAGGAAGGCTGTTGATGGCGGGGAGGAGTGCCTGTTGGAGTGGGCTCGACGAGTCACGGGCTATGGATATGGGCATGGTCCTGGGCTAAGTCGGCCCATCATACCGGTCTTGTTGATGGGCTCCGGGCTCGGAGAGGGCGCGGAGGAGATGGGTGAGTTGTTGCGGATAGGGATAAAGTGCACGGCGGAGGCACCGCAGGCCAGGCCCAATATGAAGGAGGTTTTGTCTATGCTGGTTAACACATTGAACCCAAAAGGGGGATGA 3291 0.4622 MSEQETHSRGFMIVCFLVLFSAGKIAAQDILDTERQILLELRTHLDNQTRTDRGRYRLWNANSTSLCEWPGISCSHTGTTSAARVVGIDLSDSSIAGEIFQNFSQLTELTHLDLSTNTITGEIPADLRRCSNLVHLNLSHNLLEGEIDLTGLTRLETLDLSGNRLHGDIGLNFPAICDNLVTLNVSGNNFTGSIDHCFDQCLKLQYLDLSTNNLSGSIWMGFARLKEFSVSENYLTGPLYEQAFPENCNLEVLDVSYNGFTGNAPKNVSKCKNLAILNLSSNKFSGDIPVELGSISGLQALYLANNTFSRSIPETLLNLTTLNFLDLSGNGFGGEIQDTLGKLKQVKFLLSYSNAYTGGLNSSGILKLPNISRLDLSNNSFSGPLPIEISRMTSLKFLMLAYNQFTGTIPAEFGNLAQLQALDISFNNLTGPIPPSLGNLSSLLWLMLANNSLTGEIPKELGKCTSLLWLNLENNNLTGNFPPELTNIGRNATATFELNRNEVNGIPAGSVECLAMKRWIPADYPPFSFVYSILTRKNCISIWDRLLKGYGIFPICSSGSFFRLKEISGYVQLSGNNLIGEVPSEIGNMQNFSMLHLGLNKFSGKIPAVIGDLPLVVLNITRNNFSGEIPWDIGNLKCLRNLDLSYNNFSGTFPTSLNNLTELSKFNISYNAFISGTIPPTGQLATFDKDSYLGDPLLTLPSFIDSVPDDTENTTSRRDHEIRNRNPKKLSMFLAFLAVTLALLVFGLLSFILCSLAKTRSHDPEGYLLEDTKNQHNSDNSSRWSSELIKVIHLNKIAFTHDDILKATGNFSDNRVIGKGGFGTVYRGVFPDGIEVAVKKLQREGLEGEREFRAEMEVLSGYGFGWPHPNLVTLYGWCLNGSEKILVYEYMEGGSLEDVVTDRTRLTWKRRLEIAIDVARALVYLHHECFPPIVHRDVKASNVLLDKHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVVAMELATGRKAVDGGEECLLEWARRVTGYGYGHGPGLSRPIIPVLLMGSGLGEGAEEMGELLRIGIKCTAEAPQARPNMKEVLSMLVNTLNPKGG 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4737g00038 1096 Gene3D Ribonuclease Inhibitor 245 348 IPR032675 -
Pral4737g00038 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 933 945 IPR008271 GO:0004672|GO:0006468
Pral4737g00038 1096 CDD STKc_IRAK 817 1087 - -
Pral4737g00038 1096 Pfam Leucine rich repeat 249 306 IPR001611 GO:0005515
Pral4737g00038 1096 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Pral4737g00038 1096 Pfam Leucine rich repeat 418 477 IPR001611 GO:0005515
Pral4737g00038 1096 SUPERFAMILY L domain-like 570 683 - -
Pral4737g00038 1096 SUPERFAMILY Protein kinase-like (PK-like) 784 1087 IPR011009 -
Pral4737g00038 1096 Gene3D Ribonuclease Inhibitor 177 244 IPR032675 -
Pral4737g00038 1096 SUPERFAMILY RNI-like 82 290 - -
Pral4737g00038 1096 Gene3D Ribonuclease Inhibitor 550 715 IPR032675 -
Pral4737g00038 1096 Gene3D Ribonuclease Inhibitor 451 490 IPR032675 -
Pral4737g00038 1096 Gene3D Transferase(Phosphotransferase) domain 1 891 1094 - -
Pral4737g00038 1096 Gene3D Phosphorylase Kinase; domain 1 771 890 - -
Pral4737g00038 1096 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Pral4737g00038 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 505 - -
Pral4737g00038 1096 SMART LRR_typ_2 392 415 IPR003591 -
Pral4737g00038 1096 SMART LRR_typ_2 416 439 IPR003591 -
Pral4737g00038 1096 SMART LRR_typ_2 106 130 IPR003591 -
Pral4737g00038 1096 SMART LRR_typ_2 152 172 IPR003591 -
Pral4737g00038 1096 SMART LRR_typ_2 440 464 IPR003591 -
Pral4737g00038 1096 SMART LRR_typ_2 636 660 IPR003591 -
Pral4737g00038 1096 SMART LRR_typ_2 295 319 IPR003591 -
Pral4737g00038 1096 SMART serkin_6 811 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4737g00038 1096 ProSiteProfiles Leucine-rich repeat profile. 132 153 IPR001611 GO:0005515
Pral4737g00038 1096 ProSiteProfiles Protein kinase domain profile. 811 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4737g00038 1096 SUPERFAMILY L domain-like 222 483 - -
Pral4737g00038 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 409 1088 - -
Pral4737g00038 1096 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 336 - -
Pral4737g00038 1096 ProSitePatterns Protein kinases ATP-binding region signature. 817 840 IPR017441 GO:0005524
Pral4737g00038 1096 Pfam Protein kinase domain 812 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4737g00038 1096 FunFam Leucine-rich repeat receptor protein kinase MSP1 773 890 - -
Pral4737g00038 1096 Gene3D Ribonuclease Inhibitor 350 450 IPR032675 -
Pral4737g00038 1096 Gene3D Ribonuclease Inhibitor 30 176 IPR032675 -
Pral4737g00038 1096 SMART LRR_sd22_2 152 173 - -
Pral4737g00038 1096 SMART LRR_sd22_2 636 662 - -
Pral4737g00038 1096 SMART LRR_sd22_2 416 442 - -
Pral4737g00038 1096 SMART LRR_sd22_2 106 135 - -
Pral4737g00038 1096 FunFam Leucine-rich repeat receptor-like protein kinase 891 1095 - -
Pral4737g00038 1096 PRINTS Leucine-rich repeat signature 152 165 - -
Pral4737g00038 1096 PRINTS Leucine-rich repeat signature 109 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4737g00038 Pral-Chr4737 251565 255900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4737g00038 12 1087 Receptor kinase-like Gene Family AT1G55610 31.931 6.13e-149 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pral4737g00038 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4737g00038 - - gmx:100816573 1472.99