Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4737g00029 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCACCGGATCGGCTTCTGGAGATCTCCGAGAGAGTGTATGTTTTCGATTGTTGCTTCTCCACAGATGTATTGGAAGAAGATGAATACAAAGTTTATATGGGGGGGATTGTAGCTCAGCTGCAGGATCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTTAGGGAAGGGGAGAAGCGAAGTCAAATTTCAGATATATTGTCTCAATATGACATGACAGTTATGGAATACCCTCGACAATACGAGGGCTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGCCAACAAAATGTTCTTTTGATGCATTGTGAAAGAGGAGGTTGGCCTGTGCTTGCGTTTATGCTGGCAGGTCTTCTATTGTACCGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAAATGGTCTACAAGCAAGCCCCTAAAGAACTTCTCCAGCTTCTATCTCCTTTGAACCCACAACCTTCTCAGTTGAGATATCTTCAATACATTTCCAGGAGAAATCTGGGTTCTGAGTGGCCTCCATCAGACACCCCCTTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCGTTATTTGATGGAGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCAGGACCCTTCAAAACTTGTTAATAGAAGTTCCAAGCTTCTTTTTTCTACTTCAAAGAACAAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTATGCTGGTGAAAATTGATATCCAGTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATACGGATGATGATTTCAGTCGTGAGGAGATGATGTTCAGACTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTAGTGCTCAACCGTGATGAGGTTGATATTTTGTGGGATTCTAAGGATCAATTTCCCAGGGATTTTAAAGCAGAGGTACTTTTCTTGGACGCTGATGCTGTTATGCCTAATCTGACCACAGTCAGGGCAAGTGAAGATGCAAATGAGACAGGAACTGCTTCACCTGAGGAATTTTATGAGGTGGAAGAGATATTTAGCAACGTAGTTGATGTGCAGGAAGGTAAGGTAGACTATGATTCTCTTCCGGCTCATGATAGCGTTGTAGATGATCAAAACCAAAAAGAAGTATGGAAAGAGGACTTCGATCCTCCCGCTTTTCAGGAATGTACATCAGATGATCGGACCTACAAACAGGGCAGAAGGATGGATTCTGGTACTAATGCAGTGAAAGACATTGCTATTGATGATGTGAAGTACAAGCTTGATGACAGCGTGGATTCTACTATTCATGAAGTGAAAGATATTGCTGTGGATGATGGAGAAATTAGAAATACTTCTACGATAGTCACTACTGATACCATTATGGAAATGAAGGGTGTCAATTCAGACGTGCATGGACAATTGGAAGATATGGACTGTAAATATGATGAATTCGGCAATGCAACAGAGGAGAAATTAGATTCCAAGGCTGGCCACCAGAAGCACGATATTTCCAGGCAAAAGTCTGATAAAGTACCACCTGTGGCAAAAAAACAACTTTTATCAAACTCGAAGCCAGTGGGAGATACATTTACAGCTAAGCAAAAGATTAAGCAGCTTGAATCACAAGGTACTCAGGCAAAACAAGCGAAGCCAAATGCAGTAACCAGGTGGATTCCTACTAACAAAGGTTCTTACACAAATTCAATGCATGTTTACTATCCGCCATCAAGGTATAATAGTGCACCTGCCTCTCTTTCCAATGCTAACTCTTTAAATGATAAAACTATGGATGCCAAATCAAGGTCTGCCTCTGCACCTATTGTCTCTGGGACACTTGTTTCTAGTGACAAGACAAATGGATTGAAATGTCAAAAGGTGGATGGACCAAAATCTGCTGACTCCATAGCGGAAATGGAAGAAGAAAACTTACCATCAATTGTAGAGACATGTCTTCAAACACCAAGTCAAGCACCACTTAATGGCCCAACACAAGCATTACAACCACCTGCTCCTCCACCGCCACCGCCACCGCCACCTTCATTTCATGCTAAAAACTCTAAGGCATATGCATTTGAAACATCACCAGTTAATAGACAAAACCAAGAGATGGATTTACAACCTGTAACTTCACCTCCTCCTCCCCCTGCAGCTCCTCCTCCTTTTACTAATAGAACAATCACATTAGGAGGTCTTGGAATGTCTAGTGTAGTTGCCCCTCCTACTCCCCCTTCTTGTCCTCCTCCACCACCTCCACCGCCGCCACCTCCAAGATATGGATTTTCAATCTTTCCGCCTCCCCCTCCTCCCCCACCCCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCATCTTCAAGGACCCACCCCCCACCTCCACCACCTCTGCCAGCACCTTCTTTGGGTAGAGCTCCACCTCCACCTCCACCGCCACCTCCGCCCCCTCCTTCGAGTAGAGCTCCACCACCGCCACCTCCCCCACCTCCTTTGAGCATAGCTTCACCACCAACACCTCTTTTACCTCCTTCAAGTAGAGCTTCTCCTCCTCCTCCTCCCCCCCCCACCACCTCCTCCTCCTCCTCTCCTCCTTTTAGTAGAGCACCTCCACCTCCACCTCCACCGTCAAGAGGAGCACCACCTCCCCCATCAAGGGGAGCACCATCTCCACCACCACCTCCCCCATCAAGAGGAGCACCTCCACCACCCCCACCTCCAATGTCTAGAGCCCCACCTCCTCCCCCTCCTCCTAGTGGGCGAGGCATACCTCCTCCCCCTCCTGCTGCTGGTCGAGGCCCGCCTCCTCCCCCTCCTCCCGGAGTGCGTGCTCCTAATGCTCCAACTCCCCCTGGACCTCCAGGTGGTACACCACCACCACCTCCACCTTTGGGCTCAAGAGGTTCAAATTCTGATCCAAGGGGAAGAGGACGTGGACTTTCACGTCCTATTGGGGTTGGTGCAGTAGCACCTAAACGTTCCTCCTTAAAGCCTCTACATTGGAGTAAGGTGACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTGCAAAGACATGGAGAACCTCAAATTGCCCCAGAATTTGACTTTTCAGAGCTAGAGAGCCTTTTCTCTGCAAATGTTCCTAAACCTACTGGTTCAAGTGGTAAATCTGGAGATCGACGTAAATCTGCTGGGTCCAAACCTGACAAAGTTCACTTGATTGACCTGAGGAGGGCCAATAATACTGAAATTATGCTTACAAAGGTTAAAATGCCCCTTTCAGATATGATGGCTGCAGTACTAGCTATGGATGACTCCGTATTAGATGTTGATCAGGTTGAAAATCTCATCAAATTTTGTCCTACTAAAGAGGAGATGGAACTTTTGAAGGGATATGCTGGGGACAAGGAGAATTTGGGAAAGTGTGAGCAGTATTTTTTGGAGCTGATGAAAGTTCCCCGAGTGGAGTCAAAATTAAGAGTATTTTCTTTCAAGATCCAGTTTGGTTCTCAGATTACTGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTATCAAGCTTAAGGAGATAATGAAGAAAATTCTGTACTTGGGGAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTTAAGTTGGATAGTCTATTAAAGCTCACTGACACTCGAGCTTCTAACAATAAGATGACACTGATGCATTACCTTTGCAAGGTCCTTGCTGAAAGGTCACCTGGGCTCCTTGATTTTCACCTGGACCTAGTCAGCCTGGAAGCTGCTACTAAGATACAATTGAAGTCGTTAGCTGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTCAGGCAGGAGCTTGCTGCATCTGAAAACGATGGACCTGTATCTGAAGTTTTCCGCAAGACATCAAAAGAATTTGTTATTGGTGCTGAGTCAGAGGTGACATCTGTAACAAGTTTATACTCTGTGGTGGGTAGAAATGCAGATGCACTAGCACTTTATTTTGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCATTAACTTGACAAAGAAAAATGCAAGGTAG 4281 0.4557 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGEKRSQISDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPKELLQLLSPLNPQPSQLRYLQYISRRNLGSEWPPSDTPLYLDCLILRVLPLFDGGKGCRPVVRVYGQDPSKLVNRSSKLLFSTSKNKKHVRLYQQAECMLVKIDIQCRVQGDVVLECIHTDDDFSREEMMFRLMFHTAFVRSNILVLNRDEVDILWDSKDQFPRDFKAEVLFLDADAVMPNLTTVRASEDANETGTASPEEFYEVEEIFSNVVDVQEGKVDYDSLPAHDSVVDDQNQKEVWKEDFDPPAFQECTSDDRTYKQGRRMDSGTNAVKDIAIDDVKYKLDDSVDSTIHEVKDIAVDDGEIRNTSTIVTTDTIMEMKGVNSDVHGQLEDMDCKYDEFGNATEEKLDSKAGHQKHDISRQKSDKVPPVAKKQLLSNSKPVGDTFTAKQKIKQLESQGTQAKQAKPNAVTRWIPTNKGSYTNSMHVYYPPSRYNSAPASLSNANSLNDKTMDAKSRSASAPIVSGTLVSSDKTNGLKCQKVDGPKSADSIAEMEEENLPSIVETCLQTPSQAPLNGPTQALQPPAPPPPPPPPPSFHAKNSKAYAFETSPVNRQNQEMDLQPVTSPPPPPAAPPPFTNRTITLGGLGMSSVVAPPTPPSCPPPPPPPPPPPRYGFSIFPPPPPPPPPPPPPPPPPPPPPPPPPPPPSSRTHPPPPPPLPAPSLGRAPPPPPPPPPPPPSSRAPPPPPPPPPLSIASPPTPLLPPSSRASPPPPPPPTTSSSSSXPPFSRAPPPPPPPSRGAPPPPSRGAPSPPPPPPSRGAPPPPPPPMSRAPPPPPPPSGRGIPPPPPAAGRGPPPPPPPGVRAPNAPTPPGPPGGTPPPPPPLGSRGSNSDPRGRGRGLSRPIGVGAVAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELESLFSANVPKPTGSSGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEMELLKGYAGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRKSIKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVRQELAASENDGPVSEVFRKTSKEFVIGAESEVTSVTSLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKNAR 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4737g00029 1427 SMART PTEN_C2_2 198 338 IPR014020 -
Pral4737g00029 1427 SMART it6_source 690 1427 IPR015425 -
Pral4737g00029 1427 SUPERFAMILY Formin homology 2 domain (FH2 domain) 963 1409 - -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 1063 1091 - -
Pral4737g00029 1427 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 1403 1427 - -
Pral4737g00029 1427 Gene3D - 205 336 - -
Pral4737g00029 1427 Gene3D Formin, FH2 domain 1015 1401 IPR042201 -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 1403 1421 - -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 712 728 - -
Pral4737g00029 1427 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Pral4737g00029 1427 FunFam Formin-like protein 1013 1401 - -
Pral4737g00029 1427 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 729 743 - -
Pral4737g00029 1427 Pfam Formin Homology 2 Domain 1018 1389 IPR015425 -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 642 1019 - -
Pral4737g00029 1427 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 512 533 - -
Pral4737g00029 1427 Coils Coil 1296 1323 - -
Pral4737g00029 1427 PANTHER FORMIN-J 1 778 - -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 1066 1081 - -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 761 995 - -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 668 685 - -
Pral4737g00029 1427 MobiDBLite consensus disorder prediction 686 704 - -
Pral4737g00029 1427 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1014 1415 IPR015425 -
Pral4737g00029 1427 CDD PTP_PTEN-like 16 190 - -
Pral4737g00029 1427 Coils Coil 1390 1419 - -
Pral4737g00029 1427 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4737g00029 Pral-Chr4737 144864 156149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4737g00029 1 610 FH2 protein (formin) Gene Family AT5G07740 66.667 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4737g00029 - - pcin:129307727 1289.63