Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4737g00009 ATGGGAGAGAAAGAGTGGTATTTTTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGAGCTACTGAAGCAGGGTACTGGAAGGCCACAGGGAAAGATAGAGAGATTTACAGAGGGAAATCGCTGGTGGGGATGAAGAAAACTCTGGTTTTTTACAGAGGAAGAGCACCAAAAGGAGACAAATCCGATTGGGTCATGCATGAATTCAGATTAGATGGTAAATTCTCTGTCCACAACCTCGCCAAACCTGCAAAGAACGAGTGGGTTATTTGCAGGGTGTTTCGGAAGAACTGTGGCGGCAAGCAAATCCATATGAGGTTTGGATCCACCGGAAATGGATTGGGTTCTTCAGTTTTACCACCTCTCGCGGATTCTTATTCTCCTTACGTTGGGAAGACCGAACCCAAGATGACTGAATCGGCATGCGTGTCCTGCTTCTCCATTGCAATCGATGATCAAAGAAACCAAGGAGGGATCTTTGATTCCTTAGGAAACTCCCTTTTGGGGATTCCTTCAAATCCTCCAGAAATCCTGCCAAGAATCCCTCTTCCTGGATCATCCTATTGTTCTCAACCTTTTCAAGCCCCTTCAAATTTGCCCATGTCAGGTCTTGCTTTCTCTGGGCAGGACCAGAACCTCCTGAAGGCTTTTCTTGAAAACCAAGGATCAAACTTGAGAAATGGTTTTAACTCCAAGGGAGAACAAATTGCAACTCTTTCACAAGAAACAGGTCTCAGCCTCACCACTGATATGAATCCTGAAATCTCTTTTGTGATATCAAGTTTTGATATGGGTAGGAGGGCTTTTGAGAATCATCAGCAAAACCTCTCTGCTTCTTCTGCTGACCCAGTGGACCATGATAGCTTGTTGTGGAAACACTAA 894 0.4474 MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYRGRAPKGDKSDWVMHEFRLDGKFSVHNLAKPAKNEWVICRVFRKNCGGKQIHMRFGSTGNGLGSSVLPPLADSYSPYVGKTEPKMTESACVSCFSIAIDDQRNQGGIFDSLGNSLLGIPSNPPEILPRIPLPGSSYCSQPFQAPSNLPMSGLAFSGQDQNLLKAFLENQGSNLRNGFNSKGEQIATLSQETGLSLTTDMNPEISFVISSFDMGRRAFENHQQNLSASSADPVDHDSLLWKH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4737g00009 297 SUPERFAMILY NAC domain 2 100 IPR036093 GO:0003677|GO:0006355
Pral4737g00009 297 ProSiteProfiles NAC domain profile. 1 100 IPR003441 GO:0003677|GO:0006355
Pral4737g00009 297 Gene3D NAC domain 1 103 IPR036093 GO:0003677|GO:0006355
Pral4737g00009 297 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 211 - -
Pral4737g00009 297 Pfam No apical meristem (NAM) protein 2 75 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4737g00009 Pral-Chr4737 49988 51431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4737g00009 1 289 NAC Transcription Factor Family AT5G61430 54.949 2.62e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4737g00009 NAM 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4737g00009 - - qsa:O6P43_022865 360.533