Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4737g00008 ATGGACTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTCATCACTCATTATCTGTTCAAGAAGGCCACTTTCACAAACTTCTCTGCTATAGCCATTGGAGAAGTGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCACGGAAAGCGAAAATGGGAGAGAAAGAGTGGTATTTTTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGAGCTACTGAAGCAGGGTACTGGAAGGCCACAGGGAAAGATAGAGAGATTTACAGAGGGAAATCGCTGGTGGGGATGAAGAAAACTCTGGTTTTTTACAGAGGAAGAGCACCAAAAGGAGACAAATCCGATTGGGTCATGCATGAATTCAGATTAGATGGTAAATTCTCTGTCCACAACCTCGCCAAACCTGCAAAGAACGAGTGGGTTATTTGCAGGGTGTTTCGGAAGAACTGTGGCGGCAAGCAAATCCATATGAGGTTTGGATCCACCGGAAATGGATTGGGTTCTTCAGTTTTACCACCTCTCGCGGATTCTTATTCTCCTTACGTTGGGAAGACCGAACCCAAGATGACTGAATCGGCATGCGTGTCCTGCTTCTCCATTGCAATCGATGATCAAAGAAACCAAGGAGGGATCTTTGATTCCTTAGGAAACTCCCTTTTGGGGATTCCTTCAAATCCTCCAGAAATCCTGCCAAGAATCCCTCTTCCTGGATCATCCTATTGTTCTCAACCTTTTCAAGCCCCTTCAAATTTGCCCATGTCAGGTCTTGCTTTCTCTGGGCAGGACCAGAACCTCCTGAAGGCTTTTCTTGAAAACCAAGGATCAAACTTGAGAAATGGTTTTAACTCCAAGGGAGAACAAATTGCAACTCTTTCACAAGAAACAGGTCTCAGCCTCACCACTGATATGAATCCTGAAATCTCTTTTGTGATATCAAGTTTTGATATGGGTAGGAGGGCTTTTGAGAATCATCAGCAAAACCTCTCTGCTTCTTCTGCTGACCCAGTGGACCATGATAGCTTGTTGTGGAAACACTAA 1053 0.4501 MDLPPGFRFHPTDEELITHYLFKKATFTNFSAIAIGEVDLNRSEPWDLPRKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYRGRAPKGDKSDWVMHEFRLDGKFSVHNLAKPAKNEWVICRVFRKNCGGKQIHMRFGSTGNGLGSSVLPPLADSYSPYVGKTEPKMTESACVSCFSIAIDDQRNQGGIFDSLGNSLLGIPSNPPEILPRIPLPGSSYCSQPFQAPSNLPMSGLAFSGQDQNLLKAFLENQGSNLRNGFNSKGEQIATLSQETGLSLTTDMNPEISFVISSFDMGRRAFENHQQNLSASSADPVDHDSLLWKH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4737g00008 350 SUPERFAMILY NAC domain 2 153 IPR036093 GO:0003677|GO:0006355
Pral4737g00008 350 Gene3D NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
Pral4737g00008 350 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
Pral4737g00008 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 254 - -
Pral4737g00008 350 FunFam NAC domain-containing protein 100-like 12 157 - -
Pral4737g00008 350 Pfam No apical meristem (NAM) protein 4 128 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4737g00008 Pral-Chr4737 49781 51431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4737g00008 1 342 NAC Transcription Factor Family AT5G07680 56.647 5.08e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4737g00008 NAM 7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4737g00008 - - qsa:O6P43_022865 449.899