Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4735g00001 ATGAAGAAGGTGGTAACAAGAGTTAACAACACAGTGGTCCGAAACGTTCGATATGGTGAATGTCAGAAGAATCATGCAGCTTCCACGGGAGGCTATGCTGTGGATGGTTGCAGAGAGTTCATGGCTAGCTCCGGGGAAGGCACAAGCGACGCTCTCACTTGTGCGGCTTGCGGCTGCCACCGCAATTTCCACAAAAGACATGAGCAAGTCGAGAGTCGTGAGTGA 225 0.5156 MKKVVTRVNNTVVRNVRYGECQKNHAASTGGYAVDGCREFMASSGEGTSDALTCAACGCHRNFHKRHEQVESRE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4735g00001 74 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 17 67 IPR006456 -
Pral4735g00001 74 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 67 IPR006456 -
Pral4735g00001 74 Pfam ZF-HD protein dimerisation region 15 68 IPR006456 -
Pral4735g00001 74 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4735g00001 Pral-Chr4735 6989 7237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4735g00001 13 71 Zinc finger-homeobox gene family AT3G28917 78.333 4.95e-29 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral4735g00001 ZF-HD_dimer 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4735g00001 - - pcin:129307761 125.946