Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4734g00003 ATGGGGAGACCTCCCTGCTGTGACAAAATTGGGGTTAAGAAAGGACCTTGGACTCCTGAAGAAGACATCGTCTTGGTCTCCTACATCCAAGAACACGGTCCTGGCAATTGGAGATCAGTTCCCACCAATACCGGTTTGATGAGATGCAGCAAAAGCTGCCGACTGAGATGGACCAACTATCTTCGCCCAGGCATCAAACGCGGCAACTTCACGGAGCATGAAGAGAAGATGATCATCCACCTTCAAGCTCTTCTCGGAAATAGGTGGGCGGCCATAGCTTCTTACCTCCCACAGAGAACAGACAATGACATAAAGAATTACTGGAACACGCATCTGAAGAAGAAGCTGATGATGAAGAAAGGAGAAAATGGTGGCGCCATGGAAGGTGGCAGTAACAACGATCAGGAAGACGGTGGATACTTGTCGTCATCATCTTCACAACCAAACAAGGGCCAGTGGGAAAGAAGACTTCAGACCGATATCCACATGGCCAAACAAGCCTTGTGCGAAGCTCTCTCCATTGACAAGCCCTCTCCTTCATTAACCACTCATAATTTCCCCATCTCTCCCACTCATTATAATAATAAGCCCTCCATTATTTCCTCCTTCAACCCCATCACCACCACCACAAAACTACCCGACCAAACACAGACAGCACCTTCATCGTCATCGTACGCGTCGAGTGCGGATAATATAGCTCGACTTCTGCAAAACTGGATGAAGAAGACGCCAAACTCGGTCTCTGGTTCGATGTCGAGCGAAGGAGCACAGAGCGGGAGTGGGACTACAACGCCAGATCAAGAGAGTAATAGCCTCTTACAGCAAGAGGAAAGCAAGCCAAGTTTGGATTCTCACGTGCCTTTCACGCTTCTGGAGAATTGGCTCTTTGATGATGTCGCAGCTCCACAAGGACACGACGATCTGTTGACCATGTCACTTCAGGAAACTACATCAGACCTATTTCAGGCCAAGGACAAATTCTAG 984 0.4848 MGRPPCCDKIGVKKGPWTPEEDIVLVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTEHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLMMKKGENGGAMEGGSNNDQEDGGYLSSSSSQPNKGQWERRLQTDIHMAKQALCEALSIDKPSPSLTTHNFPISPTHYNNKPSIISSFNPITTTTKLPDQTQTAPSSSSYASSADNIARLLQNWMKKTPNSVSGSMSSEGAQSGSGTTTPDQESNSLLQQEESKPSLDSHVPFTLLENWLFDDVAAPQGHDDLLTMSLQETTSDLFQAKDKF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4734g00003 327 MobiDBLite consensus disorder prediction 243 282 - -
Pral4734g00003 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pral4734g00003 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pral4734g00003 327 CDD SANT 16 61 IPR001005 -
Pral4734g00003 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4734g00003 327 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4734g00003 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4734g00003 327 Gene3D - 69 137 - -
Pral4734g00003 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4734g00003 327 CDD SANT 69 111 IPR001005 -
Pral4734g00003 327 MobiDBLite consensus disorder prediction 135 153 - -
Pral4734g00003 327 MobiDBLite consensus disorder prediction 205 227 - -
Pral4734g00003 327 SMART sant 66 114 IPR001005 -
Pral4734g00003 327 SMART sant 13 63 IPR001005 -
Pral4734g00003 327 Gene3D - 13 66 - -
Pral4734g00003 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 263 - -
Pral4734g00003 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4734g00003 327 MobiDBLite consensus disorder prediction 243 284 - -
Pral4734g00003 327 MobiDBLite consensus disorder prediction 121 153 - -
Pral4734g00003 327 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4734g00003 Pral-Chr4734 20661 22571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4734g00003 1 303 MYB Transcription Factor Family AT5G62470 57.367 2.49e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4734g00003 Myb_DNA-binding 4.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4734g00003 K09422 - cit:102626104 393.275