Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4734g00002 ATGGGGAGACCTCCCTGCTGTGACAAAATTGGGGTTAAGAAAGGACCTTGGACTCCTGAAGAAGACATCGTCTTGGTCTCCTACATCCAAGAACACGGTCCTGGCAATTGGAGATCAGTTCCCACCAATACCGGTTTGATGAGATGCAGCAAAAGCTGCCGACTGAGATGGACCAACTATCTTCGCCCAGGCATCAAACGCGGCAACTTCACGGAGCATGAAGAGAAGATGATCATCCACCTTCAAGCTCTTCTCGGAAATAGGTGGGCGGCCATAGCTTCTTACCTCCCACAGAGAACAGACAATGACATAAAGAATTACTGGAACACGCATCTGAAGAAGAAGCTGATGATGAAGAAAGGAGAAAATGGTGGCGCCATGGAAGGTGGCAGTAACAACGATCAGGAAGACGGTGGATACTTGTCGTCATCATCTTCACAACCAAACAAGGGCCAGTGGGAAAGAAGACTTCAGACCGATATCCACATGGCCAAACAAGCCTTGTGCGAAGCTCTCTCCATTGACAAGCCCTCTCCTTCATTAACCACTCATAATTTCCCCATCTCTCCCACTCATTATAATAATAAGCCCTCCATTATTTCCTCCTTCAACCCCATCACCACCACCACAAAACTACCCGACCAAACACAGACAGCACCTTCATCGTCATCGTACGCGTCGAGTGCGGATAATATAGCTCGACTTCTGCAAAACTGGATGAAGAAGACGCCAAACTCGGTCTCTGGTTCGATGTCGAGCGAAGGAGCACAGAGCGGGAGTGGGACTACAACGCCAGATCAAGGCCTGGACTATAGCTCTCTCTTGAGCTTCAATAACTCCTCCTCCAATAATAACAACATGAACAATAATAATAACAACTCTTCTGATGTGTCCACAGAGAGTAATAGCCTCTTACAGCAAGAGGAAAGCAAGCCAAGTTTGGATTCTCACGTGCCTTTCACGCTTCTGGAGAATTGGCTCTTTGATGATGTCGCAGCTCCACAAGGACACGACGATCTGTTGACCATGTCACTTCAGGAAACTACATCAGACCTATTTCAGGCCAAGGACAAATTCTAG 1080 0.4759 MGRPPCCDKIGVKKGPWTPEEDIVLVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTEHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLMMKKGENGGAMEGGSNNDQEDGGYLSSSSSQPNKGQWERRLQTDIHMAKQALCEALSIDKPSPSLTTHNFPISPTHYNNKPSIISSFNPITTTTKLPDQTQTAPSSSSYASSADNIARLLQNWMKKTPNSVSGSMSSEGAQSGSGTTTPDQGLDYSSLLSFNNSSSNNNNMNNNNNNSSDVSTESNSLLQQEESKPSLDSHVPFTLLENWLFDDVAAPQGHDDLLTMSLQETTSDLFQAKDKF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4734g00002 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 294 - -
Pral4734g00002 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pral4734g00002 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pral4734g00002 359 CDD SANT 16 61 IPR001005 -
Pral4734g00002 359 MobiDBLite consensus disorder prediction 243 312 - -
Pral4734g00002 359 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4734g00002 359 FunFam MYB-related transcription factor 13 66 - -
Pral4734g00002 359 CDD SANT 69 111 IPR001005 -
Pral4734g00002 359 MobiDBLite consensus disorder prediction 135 153 - -
Pral4734g00002 359 SMART sant 66 114 IPR001005 -
Pral4734g00002 359 SMART sant 13 63 IPR001005 -
Pral4734g00002 359 Gene3D - 69 137 - -
Pral4734g00002 359 Gene3D - 13 66 - -
Pral4734g00002 359 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4734g00002 359 MobiDBLite consensus disorder prediction 179 227 - -
Pral4734g00002 359 MobiDBLite consensus disorder prediction 121 153 - -
Pral4734g00002 359 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4734g00002 359 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4734g00002 359 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4734g00002 Pral-Chr4734 20661 22571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4734g00002 1 345 MYB Transcription Factor Family AT5G62470 53.297 8.61e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4734g00002 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4734g00002 K09422 - qsa:O6P43_001953 397.127