Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4732g00001 ATGGAAGGAGGAGATGATCTCCACCACCACCACCACCACAACCACCATCATCACCACCGTCCCACCTTTCCCTTTCAGCTCCTCGAGAAGAAAGAAGATCAGGAAGCTGCTTCTTGCTCCACGTCTTCCCCTTACCCTTCTCTAGCCATCTCTGCCGAACCTGCCTCCCCCAATCCCAATCGATCCAACCAGATCGTTCCTTCCACCGAACCTGCTTCCAATAAGAAGCCTCCGCCTAAGAGAACCTCCACCAAGGACCGCCACACCAAGGTCGACGGACGTGGCCGTCGCATTAGAATGCCTGCCCTTTGTGCAGCTCGAGTCTTCCAGCTCACTCGCGAGCTCGGCCACAAGTCTGACGGTGAGACCATCGAGTGGCTGCTCCAGCAGGCTGAGCCTGCTGTCATCGCTGCCACCGGCACTGGGACCATCCCGGCTAACTTCACTTCGCTTAACATATCCTTGAGGAGCTCAGGATCCACTATGTCGGTCCCTTCTCAGTTAAGATCGTCCTACTTTAACCCCAACTTCTCCGTCCAACAGCGCCGGAGTCTATTCCCAGGAATTGGTTTGTCTTCCGATAATACCCCCGCCTCTACGCTTCTAAATTTTCAATCCAGTAACCTAACCACAAACCTGTTGCAAGCTAAGCAAGAGCTGCGCGAGGGGGAGGGTCCGCCTTCGGCTGCTACGACGTTGGATTTTTCGCCAGACACCCCGGAAGAAGGGATGGGAAGGAAACGGCGGCCGACGGAGCAGGACTTGTCGTCAACGCAGCATCAAATGGGGAGTTATCTGTTGCAGTCGAGCGCAGGGGCGATCCCGGCCAGCCATGCTCAGATTCCAGCCAACATTTGGATGTTGACGAATTCAAGTAACCAGGTCATGAGCGGTGATCCTATATGGACATTCCCGTCGGTAAACAACAGTGGATTGTATAGGGGAAGCATGTCAAGTGCGTTGCACTTCATGAACTTCCCCACACCCATGGCCTTATTGCCGAGTCAGCAATTAGGTTCGTCGGGGATAAGTAGTGGCGGCGGGGGCGGGGCCGGGGGCGGGGGCGGCAACATTAACGAAGGACATTTGAGCATGCTGGCAGGGCTGAGCCCGTACCGGCCGGTGATCGGGCTGTCAGAGTCTCAGGCGAGCGGGTCCCACTCACATCACGGAGGCGGAGGCGACGATCGGCACGACACCACCAGCCACCACTCATAG 1218 0.5665 MEGGDDLHHHHHHNHHHHHRPTFPFQLLEKKEDQEAASCSTSSPYPSLAISAEPASPNPNRSNQIVPSTEPASNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDNTPASTLLNFQSSNLTTNLLQAKQELREGEGPPSAATTLDFSPDTPEEGMGRKRRPTEQDLSSTQHQMGSYLLQSSAGAIPASHAQIPANIWMLTNSSNQVMSGDPIWTFPSVNNSGLYRGSMSSALHFMNFPTPMALLPSQQLGSSGISSGGGGGAGGGGGNINEGHLSMLAGLSPYRPVIGLSESQASGSHSHHGGGGDDRHDTTSHHS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4732g00001 405 MobiDBLite consensus disorder prediction 219 258 - -
Pral4732g00001 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 392 IPR005333 GO:0003700
Pral4732g00001 405 Pfam TCP family transcription factor 82 249 IPR017887 -
Pral4732g00001 405 MobiDBLite consensus disorder prediction 240 254 - -
Pral4732g00001 405 MobiDBLite consensus disorder prediction 37 78 - -
Pral4732g00001 405 MobiDBLite consensus disorder prediction 379 405 - -
Pral4732g00001 405 MobiDBLite consensus disorder prediction 1 96 - -
Pral4732g00001 405 ProSiteProfiles TCP domain profile. 84 138 IPR017887 -
Pral4732g00001 405 MobiDBLite consensus disorder prediction 390 405 - -
Pral4732g00001 405 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4732g00001 Pral-Chr4732 16971 18683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4732g00001 75 397 TCP Transcription Factor Family AT3G47620 45.499 8.86e-64 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4732g00001 TCP 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4732g00001 - - vvo:131635423 519.62