Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4731g00009 ATGGGATCAGAAGCTCCCGCTATGGCAGCCGAGGAAGTCAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCTGGTAAAAAGAACCAAGGGAAAATTCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATCTGAATGATCTCTTTGTCGATCTTGCCAATGCTCTTGAACTAGGTCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCCACTAAGCTGCTAAGGGACCTGCTCGGTCAGATTGAGGCCCTTGAGAAGGAGAATGTGTCTCTGCTGTCTGAATCACATTACGTTACCATGGAGAAGAATGAGCTGCAGGAGGAAAATTCTGATCTAGAAACACAAATAGAGAAACTTCAAGGCGAGATAGAAGCACGAGTAGCACAATCTAAACCTGACCTAAATGCACCTCCTCCAACAGAAGAACTTGAGCCACCAGAGCAAACAATTTTTCCTAGAGAGTGTCTCCAATTGCCTACCGTTGATCCTACATTGCAACAAGGACCCGCGGTAGTAGTTGTCCCCTTTCGTCCCCAGCTTCAACCTTCTTTTCCCACCCCAAACATCACTGAGCTCACTTCAAACTCCATTGTTAGTAAACCTCATGCCAGGTATCCAACCCCTGCAGACTCATGGCCATCGCAGTTGCTTGGAGAGCAGCCAACATCAAGCTAA 699 0.4607 MGSEAPAMAAEEVNMLEGTSKTSSCPGKKNQGKIPKRIHKAEREKMKREHLNDLFVDLANALELGQQNNGKASILCEATKLLRDLLGQIEALEKENVSLLSESHYVTMEKNELQEENSDLETQIEKLQGEIEARVAQSKPDLNAPPPTEELEPPEQTIFPRECLQLPTVDPTLQQGPAVVVVPFRPQLQPSFPTPNITELTSNSIVSKPHARYPTPADSWPSQLLGEQPTSS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4731g00009 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 85 IPR011598 GO:0046983
Pral4731g00009 232 MobiDBLite consensus disorder prediction 17 36 - -
Pral4731g00009 232 Coils Coil 110 137 - -
Pral4731g00009 232 Gene3D - 33 111 IPR036638 GO:0046983
Pral4731g00009 232 PANTHER TRANSCRIPTION FACTOR BHLH47 1 231 - -
Pral4731g00009 232 MobiDBLite consensus disorder prediction 191 209 - -
Pral4731g00009 232 MobiDBLite consensus disorder prediction 190 232 - -
Pral4731g00009 232 Coils Coil 82 102 - -
Pral4731g00009 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 35 101 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4731g00009 Pral-Chr4731 69125 72064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4731g00009 1 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 49.393 2.46e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4731g00009 - - mtr:11438092 315.849