Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4731g00001 ATGCACGGTCTTGGCGATGGGCCATATTGGATGATATCCTATGGCTATTTTTTTTCCCTGTCAGTGCTCTATGTGCTATGCTTTGTGATATTTGGCTCCCTCATAGGGTTGAAATTCTTTACAACGAATGACTACAGTATCCAATTCGTTTTTTTCATCTTGATAAACTTGCAAATTTCGTTGGTATTTCTTGTGGCCACCATGTTTTCGAATGTTAAGACAGCTACAGTAATTGCATACATTGGTGTCTTTGCATCTGGGCTTTTAGGTGGCTTTCTTTTCAACTTTTTTGTTGAAGATACATCATTTCCAAGAGGGTGGATAGTTGTTTTAGAGTTGTACCCTGGGTTTGCGTTATATCGTGGACTCTATGAGTTAGCATCATATGCCTTCGAAGCACATGCTACAGGAAACAATGCGATGCGATGGGGAGATCTGAATGATAGTGTAAATGGCATGAGAGAGGTCTTAATTATCATGGTTATTGAGTGGTTTATGGTGCTTCTTGTTGCTTATTACATTGATCAAGTATCAGGAAGTCGCAAAAGTCCTCTTTTTTTCTTGAAAAGATTTCAGAAAAAGCCTATGTCATCATTCCGGAAGCCTAGCATTCATAGGCAGGGATCAAAAGTTTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAAAAAGTCGAGCAGCTGCTACTTGAACCATCTGTGAATCAGGCAATTGTATGTGACAACTTAAAAAAAGTTTATCCAGCTAGGGATGGAAACCCAGAGAAATATGCAGTGAGTTTATCTCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTGGGCCCCAACGGTGCTGGGAAGACCTCATTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCTGGTGCCGCATTTGTTCAAGGTCTGGACATTAGAACTCAGATGGATGAAATATATACTAGCATGGGCGTATGTCCACAGCATGACTTGCTTTGGGAAACTCTAACTGGAAGAGAGCACCTGCTCTTCTATGGCAGACTTAAAAATCTTAAAGGTTCGGCCTTAACACAAGCAGTGGAAGAATCCCTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCCGATAAAAAGGCTGGAAAGTACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCCAAAGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCGTCGAGAACAATTTTATGGAATGTTGTCAAGCGTGCAAAGCAGAATCGGGCAATCATACTAACCACACATTCCATGGAAGAAGCAGAGGTCTTATGTGACCGAATAGGAATTTTCGTAGATGGAAGCTGGCAGTGCATGGGAAATCCAAAGGAGCTTAAAGCAAGATATGGAGGAAGCTATGTGTTCACAATGACAACATCTATAGAACATGAGAATGAAGTGGAGGACTTGGTGCACAAGCTGTCTCCAAATGCTAGCAAGACATACCATATCTCTGGAACTCAGAAATTTGAGCTGCCGAAAGAAGAGGTCAGAATAGCAGATGTCTTCCGAGCTATTGGCTTTGCAAAGAGAAACTTCACTGTGTTTGCATGGGGTTTAACAGACACCACAATGGAAGATGTCTTCATTAAGGTTTCACGCGAGGCCCACGCATTCAACTCTTTTGTCATAATCGCTACGCAAAGTGTACTGATAGAAAATTCTGAGATAGACACATAG 1734 0.4164 MHGLGDGPYWMISYGYFFSLSVLYVLCFVIFGSLIGLKFFTTNDYSIQFVFXFILINLQISLVFLVATMFSNVKTATVIAYIGVFASGLLGGFLFNFFVEDTSFPRGWIVVLELYPGFALYRGLYELASYAFEAHATGNNAMRWGDLNDSVNGMREVLIIMVIEWFMVLLVAYYIDQVSGSRKSPLFFLKRFQKKPMSSFRKPSIHRQGSKVFVQMEKPDVSQEREKVEQLLLEPSVNQAIVCDNLKKVYPARDGNPEKYAVSLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGAAFVQGLDIRTQMDEIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRTILWNVVKRAKQNRAIILTTHSMEEAEVLCDRIGIFVDGSWQCMGNPKELKARYGGSYVFTMTTSIEHENEVEDLVHKLSPNASKTYHISGTQKFELPKEEVRIADVFRAIGFAKRNFTVFAWGLTDTTMEDVFIKVSREAHAFNSFVIIATQSVLIENSEIDT 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4731g00001 578 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 241 477 IPR003439 GO:0005524
Pral4731g00001 578 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 208 556 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pral4731g00001 578 FunFam ABC transporter A family member 7 230 505 - -
Pral4731g00001 578 ProSitePatterns ABC transporters family signature. 379 393 IPR017871 GO:0005524|GO:0016887
Pral4731g00001 578 Gene3D - 233 473 IPR027417 -
Pral4731g00001 578 Pfam ABC transporter 264 406 IPR003439 GO:0005524
Pral4731g00001 578 CDD ABC_subfamily_A 245 465 - -
Pral4731g00001 578 SMART AAA_5 270 453 IPR003593 GO:0016887
Pral4731g00001 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 468 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4731g00001 Pral-Chr4731 1086 5364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4731g00001 218 464 Calmodulin-binding Proteins AT2G36910 23.552 5.47e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4731g00001 - - gmx:100805474 939.873