Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4730g00003 ATGGGAAACTGCTTTCGGCAGCGTCCCAAGGTTGATGATACTCTCCCCCCTCACCCTATTTCCGGTACTACACATGTTTCTAGTAGAAGCAACCATTCATTTGCTCATTCAAGTCCAGTGAAAGGATACAGTGATAAAGCTAAGCCTCAGACACTCCCCACTCCAAGATTGGAAGGTGTCATACTATCCTCCCCACATTTGAAAGCCTTCACATTCAATGAGCTTAAGGATATTACTAGAAACTTTTGTCCTGATAATCTACTAGGAGAAGGAGGATTCGGTAATGTCTATAAGGGGTGGATTGATGAACAATCTCTTGGACCTGCAATGCCTGGATCCGGAATGGCTGTCGCTGTAAAGAATCTTAAGTCAAATGGTTTTCAAGGCCATAAGGAGTGGCTGTCTGAACTCAATTATCTTGGTCAACTTCATCATCCAAATCTTGTCAAACTTCTGGGATTCTGCCTTGATGGGGATAGTCGGCTTCTGGTATACGAGTACATGCCCAAAGGCAGCCTGGAGAATCATCTATTTCGCAGGGCGGCACAACCACTTCCTTGGGCAACAAGGATCAAAGTCGCTATTGGTGCTGCTCGAGGCCTTACCTTCCTCCATGACTCCGAACAACAAGTTATCTATCGTGACTTCAAGGCTTCTAACATCTTATTAGATTCGGAATTTAATGCAAAGCTCTCAGACTTTGGCTTTGCCAAAGCAGGGCCCACCGGCGACCGTACTCATGTTTCCACTCAAGTCCTTGGTACTCATGGTTATGCTGCTCCTGAATATATTCTCACAGGTTGGTTGACTGCAAAGTGTGATGTCTATAGCTTTGGGGTTGTGCTATTGGAATTACTATCAGGACGGCGTGCCATTGATCGAACGAAATCCGGAGTTGAACAGAATCTGGTGGATTGGGCAAGACCTTATTTGGGTGATAGGAGGAAGTTATTCCGGATTATGGACACCAAGTTAGAAGGGCAATATCCACAGAGGGCAGCCTATACAGCTGCAATTCTTGCTTTACAGTGCATTAGTGAGGCCAAAATCAGACCCCAGATGTCTGAAGTTCTGGCCACTCTAGAACAGCTTCAACTTGGCAGAACTTCAGCGAGTTCATCATCTAGATCTATCGCAGAAAGGAGCCCCTCCTCAAGCCCTGTGGTAGAGCGAGGTCATAAAGACACATCCTCTTTGAGACATAATCATCATTCAACAGAGACAGTGTCTATCTCCGTTCTCTTAAGTGAGACCACTACGAGATCCCCCTTGGCATCCCCTGTGAGATATTGA 1293 0.4586 MGNCFRQRPKVDDTLPPHPISGTTHVSSRSNHSFAHSSPVKGYSDKAKPQTLPTPRLEGVILSSPHLKAFTFNELKDITRNFCPDNLLGEGGFGNVYKGWIDEQSLGPAMPGSGMAVAVKNLKSNGFQGHKEWLSELNYLGQLHHPNLVKLLGFCLDGDSRLLVYEYMPKGSLENHLFRRAAQPLPWATRIKVAIGAARGLTFLHDSEQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDRTHVSTQVLGTHGYAAPEYILTGWLTAKCDVYSFGVVLLELLSGRRAIDRTKSGVEQNLVDWARPYLGDRRKLFRIMDTKLEGQYPQRAAYTAAILALQCISEAKIRPQMSEVLATLEQLQLGRTSASSSSRSIAERSPSSSPVVERGHKDTSSLRHNHHSTETVSISVLLSETTTRSPLASPVRY 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4730g00003 430 FunFam Serine/threonine-protein kinase PBS1 168 379 - -
Pral4730g00003 430 ProSitePatterns Protein kinases ATP-binding region signature. 88 120 IPR017441 GO:0005524
Pral4730g00003 430 MobiDBLite consensus disorder prediction 372 392 - -
Pral4730g00003 430 CDD STKc_IRAK 88 364 - -
Pral4730g00003 430 FunFam Serine/threonine-protein kinase BIK1 50 167 - -
Pral4730g00003 430 PANTHER OS01G0588500 PROTEIN-RELATED 44 365 - -
Pral4730g00003 430 ProSiteProfiles Protein kinase domain profile. 82 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4730g00003 430 MobiDBLite consensus disorder prediction 20 38 - -
Pral4730g00003 430 MobiDBLite consensus disorder prediction 372 403 - -
Pral4730g00003 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Pral4730g00003 430 SUPERFAMILY Protein kinase-like (PK-like) 56 361 IPR011009 -
Pral4730g00003 430 Gene3D Phosphorylase Kinase; domain 1 56 167 - -
Pral4730g00003 430 Pfam Protein tyrosine and serine/threonine kinase 86 308 IPR001245 GO:0004672|GO:0006468
Pral4730g00003 430 Gene3D Transferase(Phosphotransferase) domain 1 168 382 - -
Pral4730g00003 430 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4730g00003 Pral-Chr4730 24074 27201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4730g00003 68 426 Glycoside Hydrolase AT3G07070 47.658 2.96e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4730g00003 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4730g00003 - - qsa:O6P43_022821 600.512