Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4729g00030 ATGGGGAAGTCACCGGGAAAATGGATCAAAACTGTGCTATTTGGGAAAAAGTCATCCAAATCCAATATTTCAAAAGCAAGAGAGAAACTTGTTAAACAGAAAGAAGCGCCAATTGCTTCCAAGGCATCAGAAACTGAGTTCTCTTTTGATCCAACTCCCACTACTTTTGCTAGAAGTGAGAGGGATCTAGGAGTGGAAAATAATGGATCAGAAAATCTTTTGCTGCAGAATCAAGCAGATATTGCAGGATCTGATCATCAAGATGCCCCTTCCGATCCAGAGAGAATTATGCAGGATGAATCTGCAACAAAGGTGCAGGCTACTTTACCGCCTGATCTAGACAAAATTAAGCAGGAGGAAGCTGCAATTAAGATGCAGGCTACTTTACCTCCTGATCTAGACAAAATTAAGCAGGAGGAAGCTGTAATGAAGGTGCAAGCTACTTTCAGGGGTTATTTGGCTCGCAGGGCTTTCAGGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTGTCCGAGGGCACCTGGTTAGGAGGCAAGCTATTTCTACTTTATGTTGCATGTATGGGATTATCAAGTTACAAGCACTTCTTCGTGGCCGAAGAGTTAGGCATTCTAATGTTGGACGTGAAATGCATGGGAAGTGCAATCTTGTGAAGCCTCTGGTTGACAAGTGTGGCAACTCAGTTGGGTTAACCACAAAAATTGCAAATACGTCACCGAATGTTTTTATCCACAAGCTTCTTGCTTCATCAACTGCAAAAACTGCTTCGCGTCTTCAATACGCATCTGGGGATCAAAATGTAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCAGTTCCCAAACCCAAGAAACTCATAGACTCTAAATCTCAGAGAAAGCTGGGTAATATTTCAAATGGAGATGCTCAGATGAGCAAACCAAAACGTGCTAACTGGAAGATTCCTTCTACAAGTTTAGACTTGGTCTTAATGCGAGAAAATTCTGATTTTGAGAAGCCAAAACGAAACCTGAGAAAAGTTTCAAGCAAGCCCACAGATCCAGTGCAGGAAAGTTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTGGTAACCCTGTTGTAGAGAATTCTGCTCAGTCAGAAGTTGAATCAGAGATTGCGAAGCAGCATCCGGAAGAGGAAGCAGTTACCTCAGGCTATGGTGTTTCAGAAGACGGGATCAAAAGCTGTTCCAATGAGAAGATAAAAATGGACACAGCATTGGCCATGTCCAATGAGCCTAACGGAGTAGTTACACTTAGAATTTCAGTTGGCAAGGAGGCGTCTAACATTCCTGATACTCAAGTGCCCATCAATTCGGCACCCTTGAGAGAGAATACAAGTAGATGGAAAAACAATTCTGGTGAAGAAGATGCCAAAGTACTAAAAGATCCACACGAGAGTTGTAATGATGAAAATTCTCCCCTAATAAATGGGCATTTGAGTCTTAAGGAAGATTCAATCAGAAATGAAAACCAGAAAGCCGGTGGGAAATCCCCAGCTCTAGCTAAGCAGGAACCTGTGGAGGATGGTTTACAGAATAGCCCAACTCCCACTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATGGTGGTGAGAGAAGCAACCTTACCAGGCGGCATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCGCATTCGCCAAGAACACAGAGACCAGCTCAAGCAGGAGGCAAAGTGGGACACAGGACTGACAGAGCAACAGGTTCTTCCAGAAGTGCTAATGGAAAGTTAACTCAAGCAGAGTGGAGAAGGTGA 1875 0.4341 MGKSPGKWIKTVLFGKKSSKSNISKAREKLVKQKEAPIASKASETEFSFDPTPTTFARSERDLGVENNGSENLLLQNQADIAGSDHQDAPSDPERIMQDESATKVQATLPPDLDKIKQEEAAIKMQATLPPDLDKIKQEEAVMKVQATFRGYLARRAFRTLKGIIRLQALVRGHLVRRQAISTLCCMYGIIKLQALLRGRRVRHSNVGREMHGKCNLVKPLVDKCGNSVGLTTKIANTSPNVFIHKLLASSTAKTASRLQYASGDQNVVLSWLERWSASHFWKPVPKPKKLIDSKSQRKLGNISNGDAQMSKPKRANWKIPSTSLDLVLMRENSDFEKPKRNLRKVSSKPTDPVQESSENEFEKVKRNLRKVGNPVVENSAQSEVESEIAKQHPEEEAVTSGYGVSEDGIKSCSNEKIKMDTALAMSNEPNGVVTLRISVGKEASNIPDTQVPINSAPLRENTSRWKNNSGEEDAKVLKDPHESCNDENSPLINGHLSLKEDSIRNENQKAGGKSPALAKQEPVEDGLQNSPTPTLPSYMAATESAKAKLRAQGSPRLGQDGGERSNLTRRHSLPSSNNSKISSHSPRTQRPAQAGGKVGHRTDRATGSSRSANGKLTQAEWRR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4729g00030 624 Gene3D - 136 184 - -
Pral4729g00030 624 MobiDBLite consensus disorder prediction 569 591 - -
Pral4729g00030 624 MobiDBLite consensus disorder prediction 34 56 - -
Pral4729g00030 624 ProSiteProfiles IQ motif profile. 138 166 IPR000048 GO:0005515
Pral4729g00030 624 MobiDBLite consensus disorder prediction 447 465 - -
Pral4729g00030 624 MobiDBLite consensus disorder prediction 466 486 - -
Pral4729g00030 624 PANTHER IQ-DOMAIN 5-RELATED 1 583 - -
Pral4729g00030 624 SMART iq_5 137 159 IPR000048 GO:0005515
Pral4729g00030 624 SMART iq_5 160 181 IPR000048 GO:0005515
Pral4729g00030 624 MobiDBLite consensus disorder prediction 379 404 - -
Pral4729g00030 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 180 IPR027417 -
Pral4729g00030 624 MobiDBLite consensus disorder prediction 526 540 - -
Pral4729g00030 624 MobiDBLite consensus disorder prediction 338 362 - -
Pral4729g00030 624 Pfam Protein of unknown function (DUF4005) 515 600 IPR025064 -
Pral4729g00030 624 MobiDBLite consensus disorder prediction 447 624 - -
Pral4729g00030 624 Pfam IQ calmodulin-binding motif 162 179 IPR000048 GO:0005515
Pral4729g00030 624 Pfam IQ calmodulin-binding motif 140 159 IPR000048 GO:0005515
Pral4729g00030 624 ProSiteProfiles IQ motif profile. 162 184 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4729g00030 Pral-Chr4729 238664 244278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4729g00030 1 624 IQD Protein Family AT1G18840 39.286 1.21e-105 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4729g00030 - - pcin:129309270 882.478