Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4729g00027 ATGACGAAAGAAGAGCTTCAGAACGAAAATGATGACATGCTTATCGATGGACAAGAACCTGAAGCACCTGGGCAAAAGCAGGGAAGTCATGATCCTGGCGAGTTCAATCCCGATCACCTTAAATTATTTTACGGAAAGCTATTTCCTTGTGCTGATTTTTTCAGATGGATGTCTTACGGAAATGATGGGAAGCATCCCGGTTGCGATCCCTCTTACATCAGCCGGAGGGAATTTTCATTTACACTTGACAACGACATATTTCTACGATTCCAATCTTTCCACAACGCCGTAGAGCTTGAAAATTCCATCAGAGAAAAATGCCCATTTAAGATTGATATCGGACCTGTGTACAGCGTGGAGCCCACAAAAAGGCATGCCTATGCTCAAAGTGGTGATAATGTTTTCGCTCCAGTTGAGAGAGAGCTAATTTTCGATATTGATATGACAGATTACGATGATGTTAGATACTGCTGCACTGGTGCTGATGTTTGCTTGGATTGCTGGCCATTGATGACTATAGCTATTAAAGTGATTGATACCGCCTTAAGAGATGATTTTGGCTTTAAACACATTCTGTGGGTTTATAGTGGCCGCCGAGGTGTTCATTGTTGGGTCTGTGATGGGAAGGCAAGAAGGCTGACTAATGAGCAGAGAGCAGCTATTGCTGACTATTTTCGTGTCTATAAGGGAAATGAGAATAGTCATAAGAAGGTTTCATTAACAGGCCATGCTCTTCATCCTTTCCTGGTGAGAGCATACACTGAAGTTCTTAAAGATTTTTTTGAGAAAGGACTACTAATAAGTCAAGATTTACTTTCTACCGAAGAGAGATATGAGATGATCCTAGATTTGATTCCAGATGCAGCTATTGCTTCTGAACTTAGGGGTAGATGGCAAGATAACAGGCGGTCTTCAAGTGCAAAAGAAGACATTAATGTTGTTCGATGGGAACAGCTCAAACACTTGCTGTCAAAGAATAAGGCACTAGGACTGCGAAGGTGTGTTGAAGAGATTGTGTTCTCCTTTACTTACCCAAGGCTAGATATGGAGGTTTCGAAGCACATGAACCACTTGCTTAAAGCTCCATTCTGTGTGCACCCAAAAACAGGCCGCATATGTGTACCTATCGATCCAAATCACTGTGAGCAGTTTAATCCTACCACAGTACCTACTCTTTCACAGCTTTTAGAAGAACTTAACGAAAGAGGTCCAAGAGATGATTTAGATGATGAATGGACTGGAACTTCACTTGAGGGTGCCGTCAGCCTTTTCAGAACGTCATTCTTACAGCCTCTACTAAAAGCTTGCAAGGAGGAGATAGAAAGTTCTTACAGTGCAAAATTGCAGCAGTCGAAAAACTCCTTTAGCTGGTAA 1374 0.4199 MTKEELQNENDDMLIDGQEPEAPGQKQGSHDPGEFNPDHLKLFYGKLFPCADFFRWMSYGNDGKHPGCDPSYISRREFSFTLDNDIFLRFQSFHNAVELENSIREKCPFKIDIGPVYSVEPTKRHAYAQSGDNVFAPVERELIFDIDMTDYDDVRYCCTGADVCLDCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSLTGHALHPFLVRAYTEVLKDFFEKGLLISQDLLSTEERYEMILDLIPDAAIASELRGRWQDNRRSSSAKEDINVVRWEQLKHLLSKNKALGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNHCEQFNPTTVPTLSQLLEELNERGPRDDLDDEWTGTSLEGAVSLFRTSFLQPLLKACKEEIESSYSAKLQQSKNSFSW 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4729g00027 457 CDD AE_Prim_S 52 386 IPR014052 GO:0003896|GO:0006269
Pral4729g00027 457 PANTHER DNA PRIMASE SMALL SUBUNIT 30 442 - -
Pral4729g00027 457 FunFam DNA primase 28 438 - -
Pral4729g00027 457 SUPERFAMILY Prim-pol domain 36 401 - -
Pral4729g00027 457 MobiDBLite consensus disorder prediction 1 34 - -
Pral4729g00027 457 Gene3D DNA primase, PRIM domain 28 438 - -
Pral4729g00027 457 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 397 IPR014052 GO:0003896|GO:0006269
Pral4729g00027 457 Pfam DNA primase small subunit 144 377 IPR002755 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4729g00027 Pral-Chr4729 214509 219236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4729g00027 1 457 Core DNA Replication Machinery Family AT5G41880 63.043 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4729g00027 K02684 - qsa:O6P43_034334 776.163