Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4729g00023 ATGAATTTGCAGAGCGGTCTTCCCCTGCTTTTGCAACAATACACAGCGCTTCTGAAGAAGAACTTCTTGCTCTCATGGCGCAACAGGATGGGTTCGTTACTCCAACTTCTCTTTCCTCTCTTCTTCATGTTCCTTATGTTCGCCGTTGATAGGGCCATGCAGGCACGCTACTCCTCATCTACAGCCAACGAGAGCGTCACCGATCCCGGCACGTTGATTTCTCCTCCGATTACTCCCTGTGAGGAGAAGTTCTTCATTAAGCTTCCTTGCTATGATTTTGTTTGGAGCGGAAATGGAAGCCCCAAATTCCAGACCATTGTCAGTCGTATCATGGCAAACAATCCTGGCCGTCCTATACCTTCCTCTAAGGTTTTATCCTTTAGCAATGCAGCTGAAGTGGATGACTGGCTTTTCAAGAATCCTCTGCGTTGTCCAGGTGCTCTACATTTCACCGAAAAAAATGCAACTGTCATTGGCTATGGTGTGCAGACAAATTCAACCTTTATACAACAGCGAGGGCGCTATGAAGACCCCACTTTTGCATTTCAACTCCCACTCCAGCTTGCTGCGGAGCGTGAAATTGCTAGATACCTGATTGGAGATCCATCCTTCAGCTGGAGCTTTTCTTTCAGAGAATTTGCACACCCTGCTATAGAATCTGTCTCTACAGTGGGTACAATAGGTCCAGCATTTTTCCTTGCAATCTCCAGGCTTAACTTTGTTCTTCAGATGGAATCTTTGGCTAGAGAAAAAGAAAATAAGCTTCGTCAGGCAATGACGATGATGGGCCTCTATGACTCCGCTTACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACTCTTATCACATCACTTCTCATAGTTCTTTTGGGAATGATGTTTCAGTTTGATGCTTTTGTGAAAAACAATTTTGCAGTCGTGTTTTTTCTGTTCTTCCTTTTTGAACTCAGCATGACGGGATTTGCCTTCATGTTATCTGCTTTCATTCGTAAATCATCTTCAGCCCCAACAGTGGCATTCGCTGTATTTATTATCGGCATTTTGACTCAGATCGTTGTACTAGCAGGATATCCGTATGATAATGACAACTCCGAGGTTTTCCGAACTGTCTGGTCATTTTTCCCACCAAATCCATTTACTCAAGGTTTGCATGTGCTTTCACAAGCAACATCCACTCCTGAAGGCGATGGTGTTAGATGGAGTAAACGTGGTGAATGTGCTCCAAACAACGAAGATTGTTTCATAACAATTAATGGTATCTATATGTGGCTGTTGGGTACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTTGATAACATAATCCCAAATGCATCCGGTGTGAGGAAATCAGTCTTCTATTTCCTAAAGCCCGGATACTGGATGGGAAAAGGAGATAAAGTGAGAGAGGGTGGGGTTTGTAGTTGTGTAGGTTCAGTCCCGCCACAAGAGTATATCACACCAGATGATGAAGATGTCCTTGAAGAGGAAAACGTCGTAAAGCAGCAAGCAGCAGAATGTATGGTAGACCCAAATGTCGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCATTGAACATTGGTTGCTGCTCTAAATGCCAAAAAACTGCTTTCAAAGCTGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGTTTTGTCTGCTGGGTCCCAATGGAGCCGGGAAAACTACTGTTATTAATTGTTTGACTGGGATAACTCCAGTTACTGATGGAGATGCATTGATATATGGACACTCCATACGAAGCTCCACCAGCATGTCAAACATTCAAAAGCTTATAGGCGTCTGTCCCCAGTTTGATATCTTATGGGATGCATTGTCTGGTCAAGAACACCTCCATCTCTTTGCTAGCATTAAAGGGCTTCCCCCTTCTTCTATCAAATCAATTACTCAGAAGTCATTAGCAGAAGTAAGACTCAGAGAATCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTAAGTGTTGCCATTTCCCTTATTGGTGATCCCAAGCTAATCATTATGGATGAACCGACAACTGGCATGGATCCTATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAACGGGGCCGTGCTATTGTCCTTACGACACACTCTATGGAAGAGGCTGACATTCTAAGCGACCGCATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAGTACGGTTGAAATCACGATTTGGTACTGGTTTTATAGCTAATATCAGGTTCCATGATGCAACTTCTACAAGAAATCATGAGACAGTGAAGCAATTCTTTAAGAATAAGTTAGATGTGGTACCAAAAGAAGAGAACAGTGCCTACTTAACTTATGTGATTCCTCATGATAGAGAGGGACTCTTGATGAATTTTTTTGAGGAACTCCACGATAAAGAAGAAGAATTTGGCATATCTGACATCCAGCTGGGTCTTGCAACTCTCGAAGAGGTTTTCTTGAATATTGCAAGAAAAGCAGAGCTAGAAAGTGCTGCAGCTGAGGGGAGCTTGACAAATCTGACGTTGACTTCTGGTGAATCTGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCCGGAACTGAATCTGCTGAAAACCCCAGAGGGATTATGGTGGAAGTATATTGGGAGCAAGATGATACGGGTGCCCTCTGCATTGCTGGACACTCGCGGCAAGTTTCTGTTCCTCCCAGTGTTGAAGTATCTGCTCCTCCATCCTTAACAAGACGTCGAAGTAACAGGAGGTCAGAAACGGTTGAGGGCATTGTGATTGATCCCAGTCAAGTTAGTACTGTCAATTTCCAGTAA 2862 0.4378 MNLQSGLPLLLQQYTALLKKNFLLSWRNRMGSLLQLLFPLFFMFLMFAVDRAMQARYSSSTANESVTDPGTLISPPITPCEEKFFIKLPCYDFVWSGNGSPKFQTIVSRIMANNPGRPIPSSKVLSFSNAAEVDDWLFKNPLRCPGALHFTEKNATVIGYGVQTNSTFIQQRGRYEDPTFAFQLPLQLAAEREIARYLIGDPSFSWSFSFREFAHPAIESVSTVGTIGPAFFLAISRLNFVLQMESLAREKENKLRQAMTMMGLYDSAYWLSWLTWEAVITLITSLLIVLLGMMFQFDAFVKNNFAVVFFLFFLFELSMTGFAFMLSAFIRKSSSAPTVAFAVFIIGILTQIVVLAGYPYDNDNSEVFRTVWSFFPPNPFTQGLHVLSQATSTPEGDGVRWSKRGECAPNNEDCFITINGIYMWLLGTFFLWFILAIYFDNIIPNASGVRKSVFYFLKPGYWMGKGDKVREGGVCSCVGSVPPQEYITPDDEDVLEEENVVKQQAAECMVDPNVAVQIRGLAKTYPGALNIGCCSKCQKTAFKAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPVTDGDALIYGHSIRSSTSMSNIQKLIGVCPQFDILWDALSGQEHLHLFASIKGLPPSSIKSITQKSLAEVRLRESAKVRAGSYSGGMKRRLSVAISLIGDPKLIIMDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSVRLKSRFGTGFIANIRFHDATSTRNHETVKQFFKNKLDVVPKEENSAYLTYVIPHDREGLLMNFFEELHDKEEEFGISDIQLGLATLEEVFLNIARKAELESAAAEGSLTNLTLTSGESVKIPVGARFVGIPGTESAENPRGIMVEVYWEQDDTGALCIAGHSRQVSVPPSVEVSAPPSLTRRRSNRRSETVEGIVIDPSQVSTVNFQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4729g00023 953 CDD ABC_subfamily_A 516 749 - -
Pral4729g00023 953 SMART AAA_5 554 738 IPR003593 GO:0016887
Pral4729g00023 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 743 IPR027417 -
Pral4729g00023 953 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 490 846 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pral4729g00023 953 ProSitePatterns ABC transporters family signature. 663 677 IPR017871 GO:0005524|GO:0016887
Pral4729g00023 953 Gene3D - 504 791 IPR027417 -
Pral4729g00023 953 Pfam ABC-2 family transporter protein 32 438 IPR013525 GO:0016020|GO:0140359
Pral4729g00023 953 FunFam ABC transporter A family member 2 506 769 - -
Pral4729g00023 953 MobiDBLite consensus disorder prediction 914 937 - -
Pral4729g00023 953 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 761 IPR003439 GO:0005524
Pral4729g00023 953 Pfam ABC transporter 548 690 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4729g00023 Pral-Chr4729 183761 190419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4729g00023 556 773 Calmodulin-binding Proteins AT2G36910 22.707 3.68e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4729g00023 - - gmx:100786538 1390.56