Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4729g00022 ATGATTTTGCAGAGCGGTCTTCCCCTGCTTTTGCAACAATACACAGCGCTTTTGAAGAAGAACTTCTTGCTCTCATGGCGCAACAGGAAGGCTTCGTTCCTCCAACTTCTCTCTCCACTCTTCTTCATGTTCCTTATATTTGCCATAGATAGGGCCATTCAGGCTCGCTACTCTTCGTCTACGGCCAACGAGAGCGTCACCGATCCTGGCACGCTGACCTCTCCTCCGATTACTCCCTGTGAGGAGAAGTTCTTTGTTAAACTTCCCTGCTATGATTTTGTTTGGAGCGGAAATGGGAACCCCAAATTTCAGACCATTGTCAATCGTATCATGGCTAACAATCCTGGCCGGCCCATACCTTCCTCTAAGGTTATATCCTTTGGCAATGCAGCTGAAGTGGATGACTGGCTTTTTAATGATCCTATGCGTTGTCCAGGTGCTCTACATTTCAACGAAAAAAATGCGACTGCCATTGGCTATGGTGTACAGACAAATTCAACCTTTATACAAAAGCGAGGGCGCTATGAAGACCCCACTTTTTCGTTTCAACTCCCACTTCAGCTTGCGGCAGAGCGTGAAATTGCTAGATACCTGATTGGAGATCCATCCTTCAGCTGGAGCTTTTCTTTCAAAGAATTTGCACACCCTGCCGTAGAATTTTTCTCTACGGTGGGTTCAGTAGGTCCAGCATTTTTCCTTGCCATCGCCATGTTTAACTTTGTTCTTCAGATGGGCTCCTTGGTGACAGAAAAAGAAAATAAACTTCGTCAGGCAATGATGATGATGGGCCTCTATGACTCTGCTTACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACACTCATCTCATCACTTCTCATAGTTCTTTTCGGAATGATGTTTCAATTCGATGTTTTCCTGAAAAACAATTTCGCAGTCGTGTTTCTTCTGTTCTTCCTTTTTGAACTCAGCATGATGGGATTTGCCTTCATGTTATCTGCTTTCATTCGTAAATCATCTTCAGCCACAACAATGGGATTCTCTATATTTATTATCGGCTTTATTACTCAGATCGTTGTGCAAGCGGGATATCCATATGATAATGACAGCTCCCAGGCTTTCCGAGTTGTCTGGTCATTTTTCCCACCAAATCCATTTGCTCAAGGTCTAAATGTGCTTTCGCAAGCAACTTCCACTCCTGAAGACGATGGTGTTAGATGGAGTAAACGGGGAGAATGTGCTCCAAATGACGAGGATTGTTACATAACAATTAATGGTATCTATATGTGGCTGTTGGGTACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTTGATAACATAATGCCGAATGCATCTGGCATAAGGAAATCAGTCTTCTATTTCCTAAAGCCCGGATACTGGATGGGAAAAGGAGATAAAGTGAGAGAGGGTGGGGTTTGTAGTTGTGTAGGCTCAGTCCCACCACAAGAGTATATCACACCAGATGATGAAGATGTCCTTGAAGAGGAAAACGTTGTAAAGCAGCAAGCAGCAGAATGTATGGTAGACCCAAATGTCGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCATTGACCATTGGTTGCTGCTGTAAATGCAAAAGAACTACCGCTTTCCACGCTGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGTTTTGTCTTCTGGGACCAAATGGAGCTGGGAAAACTACTGTTATTAATTGTTTGACTGGGATAACTCCGGCTACCGATGGAGATGCATTGATATACGGACACTCCATAAGAAGCTCCACTGGCATGTCAAACATTCAAAAGTTTATAGGCGTCTGCCCCCAGTTTGATATCTTGTGGGATGCATTGTCTGGTCAAGAGCACCTACATCTCTTTGCTAGCATTAAAGGGCTTCCCCCTTCATCTATCAAATCATTTACTGAAAAGTCATTAGCAGAAGTGAGACTCACAGAGTCAGCCAAAGTGAGAGCTGGAAGCTACAGTGGGGGAATGAAACGTCGTCTCAGTGTTGCCATTTCCCTAATTGGTGATCCCAAGCTAGTCATTATGGATGAACCGACAACTGGCATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATCGAAAATGCAAAACAAGGGCGTGCCATTGTCCTTACAACACACTCTATGGAAGAGGCTGACATTCTAAGCGACCGCATAGGAATCATGGCAAAAGGAAAACTTCGTTGCATTGGCACCTCAATACGGCTAAAATCACGTTTTGGTACTGGTTTTATAGCTAATATCAGTTTCCATGGAAACAATTTTGAACAAAGTCCTGCCAATAGAGATGCAACTCCTACAAGAAATCATGAGACAGTGAAGCAATTCTTCAAGAATAATTTAGATGTGGTACCAAAAGAAGAGAACAGTGCCTACTTAACTTATGTGATTCCTCATGATAGGGAGGGAGTCTTGATGAACTTTTTCGAGGAACTTCAAGATAGAGAAGAAGAATTTGGCATATCTGACATCCAGCTGGGTCTTGCAACTCTCGAAGAGGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAGTGCTACGGCTGAAGGGAGCTCGACAATTCTGACGTTGACTTCTGGTGAATCTGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCAGGAACTGAATCTGCTGAAAACCCCAGAGGGATTATGGTAGAAGTATATTGGGAGCAAGATGATACGGGTGCCCTCTGCATTGCTGGACACTCAGGGCAAGTTCCTGTGCCTCCTAGTGTTGAAATATCTGCTCCTCCATCCTTAACAAGACGTCGAAGTCGCAGGCGGTTAGCACCTGTTGAGGGCATTGTGATTGACCCCAGTCAAGTTAGTACTGTCAATTTCCAGTAA 2898 0.4396 MILQSGLPLLLQQYTALLKKNFLLSWRNRKASFLQLLSPLFFMFLIFAIDRAIQARYSSSTANESVTDPGTLTSPPITPCEEKFFVKLPCYDFVWSGNGNPKFQTIVNRIMANNPGRPIPSSKVISFGNAAEVDDWLFNDPMRCPGALHFNEKNATAIGYGVQTNSTFIQKRGRYEDPTFSFQLPLQLAAEREIARYLIGDPSFSWSFSFKEFAHPAVEFFSTVGSVGPAFFLAIAMFNFVLQMGSLVTEKENKLRQAMMMMGLYDSAYWLSWLTWEAVITLISSLLIVLFGMMFQFDVFLKNNFAVVFLLFFLFELSMMGFAFMLSAFIRKSSSATTMGFSIFIIGFITQIVVQAGYPYDNDSSQAFRVVWSFFPPNPFAQGLNVLSQATSTPEDDGVRWSKRGECAPNDEDCYITINGIYMWLLGTFFLWFILAIYFDNIMPNASGIRKSVFYFLKPGYWMGKGDKVREGGVCSCVGSVPPQEYITPDDEDVLEEENVVKQQAAECMVDPNVAVQIRGLAKTYPGALTIGCCCKCKRTTAFHAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPATDGDALIYGHSIRSSTGMSNIQKFIGVCPQFDILWDALSGQEHLHLFASIKGLPPSSIKSFTEKSLAEVRLTESAKVRAGSYSGGMKRRLSVAISLIGDPKLVIMDEPTTGMDPITRRHVWDIIENAKQGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFIANISFHGNNFEQSPANRDATPTRNHETVKQFFKNNLDVVPKEENSAYLTYVIPHDREGVLMNFFEELQDREEEFGISDIQLGLATLEEVFLNIARQAELESATAEGSSTILTLTSGESVKIPVGARFVGIPGTESAENPRGIMVEVYWEQDDTGALCIAGHSGQVPVPPSVEISAPPSLTRRRSRRRLAPVEGIVIDPSQVSTVNFQ 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4729g00022 965 Pfam ABC transporter 549 691 IPR003439 GO:0005524
Pral4729g00022 965 SMART AAA_5 555 739 IPR003593 GO:0016887
Pral4729g00022 965 Pfam ABC-2 family transporter protein 33 438 IPR013525 GO:0016020|GO:0140359
Pral4729g00022 965 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 762 IPR003439 GO:0005524
Pral4729g00022 965 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 490 858 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pral4729g00022 965 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524|GO:0016887
Pral4729g00022 965 FunFam ABC transporter A family member 2 506 770 - -
Pral4729g00022 965 Gene3D - 504 788 IPR027417 -
Pral4729g00022 965 CDD ABC_subfamily_A 516 750 - -
Pral4729g00022 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 539 744 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4729g00022 Pral-Chr4729 169696 176184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4729g00022 557 761 Calmodulin-binding Proteins AT2G36910 21.860 8.73e-09 57.8