Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4729g00014 ATGGGCATGGACTACTATAACATACTGAAAGTGAATCGGAATGCGAGTGAGGACGATTTGAGGAAGGCCTACAAGAGGCTAGCGATGATTTGGCACCCAGACAAAAACCCAGTTAATAAGAGGGAAGCCGAGGCCAAATTCAAGCAAATTTCTGAAGCCTACGACGTTTTGAGCGATCCCCAAAAGCGTCAGATCTATGATCTCTATGGCGAGGAGGCTCTCAAGTCTGGTCAGTTCCCGCCACCTTCGCAATCCTCCTCTTCCATGTCCTCCTCGTCTTCTCGTGCTTACCAGCATTTCCAAAACCAACAACGCCAGCATAGTACCACGTCTTATCGGTTTAATCCTAGGGACGCCGACGACATTTACGCGGAAATTTTTGGGTCGGAGAATGGTGGTGCTGGTGGTGGAGGTGGGAGAAACGGTGCGCATAGGGATGGTTTTTTCAGAACTTCAAATGGTGCGTTTGGTGGAGGGACGAGGAAAGCTGCGGCGGTGGAGACTCTTTTGCCGTGTAGCTTAGAAGAGCTCTACAAAGGTGTCAAGAAGAAGATGAAGATCTCAAGGAATGTCTGTGATGCCTTTGGGAAGTTTAGGAATGTGGAGGAGATATTGACTATCGAGGTGAAACCTGGTTGGAAGAGAGGAACAAAGATTACTTTTCCTGAGAAGGGTAACCAGGAGCCTGGTATCATTGCAGCAGATCTTATATTTGTGGTGGATGAGAAGCCACATGCTGTTTATAGGAGGGATGGTAATGATCTGGTGATCAACCAAGAGATTACTCTTCTAGAGTCCCTTACAGGTAAAACCCTAGACCTGACTACCTTAGACGGAAGGAGTCTCGTGATCCCACTGACCGATATTGTCAAGCCTGGTGCTGAGATTGTTGTCCCTAGTGAGGGAATGCCCATTTCGAAAGAACCTGGGAAGAAGGGCAATTTGAGGATTAAGTTTGAGGTTAAGTACCCGTCGAGGCTAACCCCAGAGCAGAAATCTGAGCTGATAAGGGTTTTGGGTGGGAATGGAATCACAAATGTTTGA 1044 0.4761 MGMDYYNILKVNRNASEDDLRKAYKRLAMIWHPDKNPVNKREAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPSQSSSSMSSSSSRAYQHFQNQQRQHSTTSYRFNPRDADDIYAEIFGSENGGAGGGGGRNGAHRDGFFRTSNGAFGGGTRKAAAVETLLPCSLEELYKGVKKKMKISRNVCDAFGKFRNVEEILTIEVKPGWKRGTKITFPEKGNQEPGIIAADLIFVVDEKPHAVYRRDGNDLVINQEITLLESLTGKTLDLTTLDGRSLVIPLTDIVKPGAEIVVPSEGMPISKEPGKKGNLRIKFEVKYPSRLTPEQKSELIRVLGGNGITNV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4729g00014 347 Gene3D DnaJ domain 2 139 IPR036869 -
Pral4729g00014 347 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 339 - -
Pral4729g00014 347 SUPERFAMILY Chaperone J-domain 3 91 IPR036869 -
Pral4729g00014 347 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pral4729g00014 347 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pral4729g00014 347 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pral4729g00014 347 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pral4729g00014 347 FunFam DNAJ heat shock family protein 3 139 - -
Pral4729g00014 347 CDD DnaJ 4 59 IPR001623 -
Pral4729g00014 347 FunFam Dnaj homolog subfamily b member 162 243 - -
Pral4729g00014 347 Pfam DnaJ domain 4 67 IPR001623 -
Pral4729g00014 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 169 245 IPR008971 GO:0006457|GO:0051082
Pral4729g00014 347 SMART dnaj_3 3 62 IPR001623 -
Pral4729g00014 347 MobiDBLite consensus disorder prediction 74 115 - -
Pral4729g00014 347 Gene3D - 245 325 - -
Pral4729g00014 347 FunFam DNAJ heat shock family protein 244 339 - -
Pral4729g00014 347 Gene3D - 164 243 - -
Pral4729g00014 347 CDD DnaJ_C 166 327 - -
Pral4729g00014 347 MobiDBLite consensus disorder prediction 78 115 - -
Pral4729g00014 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 248 334 IPR008971 GO:0006457|GO:0051082
Pral4729g00014 347 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pral4729g00014 347 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pral4729g00014 347 Pfam DnaJ C terminal domain 167 324 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4729g00014 Pral-Chr4729 71209 76408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4729g00014 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 4.43e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4729g00014 K09510 - qsa:O6P43_022791 539.265