Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4729g00007 ATGACCCTTAAGGGTGGCACAACCCAGGCTTGTGCAGCTTGTAAATTCCAGAGAAGAAAGTGCACATCTGAATGTCTTCTTGCCCCATATTTCCCAGCAGATCAACCCAAGATGTTTCAGAATGTGCACAAGCTATTTGGAGTGAGCAATATTAAAAAGATGTTAAAGAAATTGGATCCTGCCCGGAAGAAAATAGCCATGGATTCCATCATTTTCCAAGCAAATATAAGGGACAAGTACCCTGTTCATGGTTGCTGGGAGGAAATTTGCAGGCTCCGTTACCAGATATGGCGGATGGAAGAGGAGCTTCATGCTGTTCATCAGCAGCTTGAGATTTGCAGGCAGCATTACCAGCAACATCTTGATCATCATCTTCCTGAGGATCATGTGGCTTCTCAACTAGAGTTGGGCATGACACCCTGTTCTAATGGCCTCCAACTGCTTGATCACATGCTTCAACCACAAGATTACAACAATATAGTGGCTGCATCTTTGCCTATCTCTCAGCAGCAGCAACATTCTTTCTCAAATAGCAATAATGAGGCTTATAATAATTCCCTTTACATTGATCACAAGGATAGCGTCCCCAGTCATTTGTGGGTTGAGCAACCATATGGTGATAACAGTAGTAGTTCCATGGCAATGCAGTCTCAATTGGATGCCTCACAGCAGCCACTAGTCATTCAAGAAGGAGAAGTTGTTGAAGATTATGATGAGATGCATCCATTTTTTGATACTATTGATGATAGACAATCATACGTTTATTCTCAGGAGGCTTATGAGTCAAGTTCTGAAGAATCGTTGAAAGATACGCCAAAGTGCACGGAACATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGCTTTAGTCTTACCAGTGTCAGCTGA 891 0.4265 MTLKGGTTQACAACKFQRRKCTSECLLAPYFPADQPKMFQNVHKLFGVSNIKKMLKKLDPARKKIAMDSIIFQANIRDKYPVHGCWEEICRLRYQIWRMEEELHAVHQQLEICRQHYQQHLDHHLPEDHVASQLELGMTPCSNGLQLLDHMLQPQDYNNIVAASLPISQQQQHSFSNSNNEAYNNSLYIDHKDSVPSHLWVEQPYGDNSSSSMAMQSQLDASQQPLVIQEGEVVEDYDEMHPFFDTIDDRQSYVYSQEAYESSSEESLKDTPKCTEHVAENELKNAAACFSLTSVS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4729g00007 296 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Pral4729g00007 296 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 176 - -
Pral4729g00007 296 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4729g00007 Pral-Chr4729 46731 47745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4729g00007 1 259 AS2 family AT3G47870 39.404 2.88e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4729g00007 LOB 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4729g00007 - - zju:125422406 376.326