Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4726g00001 ATGACTGATTCACGGGTTCCTTTTGGGCAAAGTCCTCACTTTCACCACCCAACCGCTGGCATCATCAAGAGGGTTCGATTGGAGAACTTCATGTGCCATAGCAACCTCGAGATTGAGCTCGGAGAGTGGGTCAATTTCGTTACTGGTCAAAATGGAAGTGGTAAGAGCGCAATCCTAACTGCATTGTGTGTTGCATTTGGATGTCGAGCAAGAGGGACTCAGAGAGCAGCGACTCTGAAGGATTTTATAAAAACCGGCTGCAGTAATGCCGTCATCCATGTGGAAATAAAAAATGAAGGAGAGGATGCTTTTAAGCCACAAATATATGGTGATGTGATCACTTTAGAACGCAGGATATCTGAATCCACAAGCTCCATCGTGTTAAAAGACTGTAGAGGAAAGAAGGTTGTCAGCCGGAAAGCAGAACTCCAGGAAATGGTTGAGCATTTTAATATTGATGTGGAGAATCCATGTGTAGTTATGAGTCAGGACAAAAGCAGGGAATTTTTACATTCAGGGAATGACAAGGATAAATTTAAGTTCTTTTACAAGGCTACACTTCTTCAGCAAGTCGATGATCTTTTGGAAAGCGTTTCTAAGGGATTAGAGCATTCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGTCCTGTAGAGAAGGAGCTTAATGAGTTAAGAGTCAAAATTACAAACATGGAACAAGTTGAACAAATATCACTGCAGATTCAGCAGTTAAAGAAAAAACTTGCATGGTCATGGGTTTATGACGTGGACAAACAAATCCAGGAACAGTGTTCAAAGATTGATAAATTAAAGGATCGAATACCTAAGTGCCAAGCAAAGATTGATGAGCAAATGAATCTGGTCGAAGAATTGAGTGCATTCTTACATAAGAAGAAAGGTCATATCAAAAACTTGTTTGAAAAGACATCTGAAGTGAAGCAGAAGAAGCAAAATTTACAACAATCTATATCTATGGCTGCAAAAGAAGTACTTGAAAAAGAACAAGAGTGCACACGCATAACTGTCAGTATTGAGAAGATGGTAAAGCGTGTTAGGACTCTTAAAGAACAGGTGCAGGATATTTACGAGAAGCATGCACAAAGTACTCAGGCTGAAGAATCTGAGATAGAGGAGATACTGAAGGTGCTCCAAAATGAGGTTGATGCTGCTGAATCAGCTCTGACAAGGTTGAGGGAAGAGGAAGCTATACTAGCTGATAATGTGCAGAGTCAAAGTAATGAAATAAGAAAGATTGCTGATGAGATTGAAGGACATGAAAGACGGTATCGTGATATCACCTTTTCCATCCGTGAGCTTAAACAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGATAGAGTGATGAACCTCCTGCGTATTATTGAGAGGAGTTATTATCGGAGGTTTAAGAGGCCTCCTATTGGTCCAATTGGTGCCCATCTGAATCTGGTTAATGGTGATAAGTGGGGTGTTGCTATTGAGCATGCAATTGGGAAGATGCTGAATGCTTTTGGGACTGATCACAAGGATTCTCTTCTTTTGAGAGAATGTGCAAAGGAAGCAAACTATGGTCACCTCCAAATTTTTATTTATGATTCAAGACCACGGTAA 1620 0.4043 MTDSRVPFGQSPHFHHPTAGIIKRVRLENFMCHSNLEIELGEWVNFVTGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFIKTGCSNAVIHVEIKNEGEDAFKPQIYGDVITLERRISESTSSIVLKDCRGKKVVSRKAELQEMVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVSKGLEHSFGLLGGLEATISPVEKELNELRVKITNMEQVEQISLQIQQLKKKLAWSWVYDVDKQIQEQCSKIDKLKDRIPKCQAKIDEQMNLVEELSAFLHKKKGHIKNLFEKTSEVKQKKQNLQQSISMAAKEVLEKEQECTRITVSIEKMVKRVRTLKEQVQDIYEKHAQSTQAEESEIEEILKVLQNEVDAAESALTRLREEEAILADNVQSQSNEIRKIADEIEGHERRYRDITFSIRELKQHQTNKVTAFGGDRVMNLLRIIERSYYRRFKRPPIGPIGAHLNLVNGDKWGVAIEHAIGKMLNAFVXTDHKDSLLLRECAKEANYGHLQIFIYDFXRPR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4726g00001 541 Pfam AAA domain 24 281 IPR038729 GO:0006302|GO:0016887
Pral4726g00001 541 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 277 445 - -
Pral4726g00001 541 Coils Coil 269 289 - -
Pral4726g00001 541 Coils Coil 304 338 - -
Pral4726g00001 541 Gene3D - 21 209 IPR027417 -
Pral4726g00001 541 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 16 540 - -
Pral4726g00001 541 Coils Coil 368 430 - -
Pral4726g00001 541 Coils Coil 346 366 - -
Pral4726g00001 541 Gene3D - 235 397 - -
Pral4726g00001 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 300 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4726g00001 Pral-Chr4726 4597 16170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4726g00001 7 541 Structural Maintenance of Chromosomes family AT5G07660 59.439 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4726g00001 K22804 - zju:107414226 728.013