Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4725g00005 ATGGCATCCATCATCATTGTTCAGCTATTCTTTTCCCTCACTTTATTTTCTTCACTTTTCTCAATATCTTCTTCTTCATCATCAACAAAATCATCTTCCTCTATAGATCTTTGGTGCAACCAAACTCCTCACCCTGAGCCATGCAAATCCCACATGAACCAGTTTAGACCGAACCATCCTTTAGAGTTCAGGAAAATGCTGGTTCGATTAGCACTGGACCAAGCACAAGTCATGCATAAGGAAGCTCAAGAACATGGCCCAAAATGTGTGACCAAGATGCAGAAATATGTCTTTAATGATTGTTTAAAGCTCTATGACAGTACGATCTTCCATCTAAACCGAACCCTCCATGCCCTACACACAGCTTCTTGCTCCCTCTCAGACGCACAAACATGGCTCAGCACTGCCCTCACTAACATCGAAACTTGTCGGGGAGGTGTGCTGGGGCTCGGAGTTGGAGAGTTTACGGCTCAAAATAATGTGAGCGACAATGTTAGGAAGATGATAAGCAATGTGTTAGCTGTAAATGGGAAATTTCTGAAGCAAGAGAATCACACAGAAGAAGAGGTGAAAGCATATCGGTTTCCGAGTTGGTTTTCTGGGCGTGACAGAAGGTTGTTGAGCTTGAAGCGATCTTCGGTGAAGGCAAATCTTGTGGTGGCTCAAGATGGTACGGGCCATTTCAAGACAGTGCAAGCCGCCATTGACGCAGCATCAAGGAGAAAAGTGAAGACGAGGTTTGTGATACGTGTGAAGAAAGGGGTTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCAAGATTATTGGCGATGGATCGAGAGTCACCATTATAACTAGTAGTCGAAGCGTCAAAGATGGAATTACCCCGGCTGCCTCCGCTACAGTAGGCATAGATGGTGCTCACTTCATTGCACGAGACCTCACTTTTAGAAACACAGCCGGTCCTGAAAAAGGTCAAGCAGTGGCACTCCGATCAGCCTCTGACCTCTCGGTCTTCTATCGATGCTCCATCGAAGGCTATCAAGACACTCTAATGGCTCATGCACAACGTCAGTTCTATAGAGACTGTAGGATTTTTGGCACAGTTGATTTCATTTGGGGCAATGCGGCAGTTGTTCTACAAAACTGTAGAATTCTTGTAAGAAAGCCACTTGCAGGGCAAGCAAACATGATCACAGCGCAAGGACGAGGCGACCCGTTTCAGAACACCGGAATATCAATAATCGATTCTCAAATTCGAGCGGCACCGGATTTTAGGCAGGTTTCACACTCACTTGAAACCTATTTGGGTCGGCCATGGCAGCAATATGCAAGGGTAGTTGTCATGAAGACTTACATTGAGGGATTGGTGAATCCGTTGGGATGGTCTCCATGGGGCGATGATGATTTTGCTCAAGATACTTGTTATTTTGGGGAATATATGAACAATGGGGCTGGTTCATCAACAAAAAGTAGGGTAAGATGGCGTGGCTTTCATGTGATAAGTAGTCCAAATGAGGCAAACCAATTCAGTGTTGCTAGTTTCCTTGCTGGTCGCACCTGGTTGCCTCGCGCTGGGGTGCCTTTTACTATTGGTGTTTAA 1593 0.4501 MASIIIVQLFFSLTLFSSLFSISSSSSSTKSSSSIDLWCNQTPHPEPCKSHMNQFRPNHPLEFRKMLVRLALDQAQVMHKEAQEHGPKCVTKMQKYVFNDCLKLYDSTIFHLNRTLHALHTASCSLSDAQTWLSTALTNIETCRGGVLGLGVGEFTAQNNVSDNVRKMISNVLAVNGKFLKQENHTEEEVKAYRFPSWFSGRDRRLLSLKRSSVKANLVVAQDGTGHFKTVQAAIDAASRRKVKTRFVIRVKKGVYEENIEVDKDNENLKIIGDGSRVTIITSSRSVKDGITPAASATVGIDGAHFIARDLTFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLAGQANMITAQGRGDPFQNTGISIIDSQIRAAPDFRQVSHSLETYLGRPWQQYARVVVMKTYIEGLVNPLGWSPWGDDDFAQDTCYFGEYMNNGAGSSTKSRVRWRGFHVISSPNEANQFSVASFLAGRTWLPRAGVPFTIGV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4725g00005 530 SUPERFAMILY Pectin lyase-like 214 529 IPR011050 -
Pral4725g00005 530 SMART PMEI_2 30 175 IPR006501 GO:0004857
Pral4725g00005 530 Pfam Plant invertase/pectin methylesterase inhibitor 34 174 IPR006501 GO:0004857
Pral4725g00005 530 Gene3D - 211 530 IPR012334 -
Pral4725g00005 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Pral4725g00005 530 FunFam Pectinesterase 211 530 - -
Pral4725g00005 530 Pfam Pectinesterase 217 515 IPR000070 GO:0030599|GO:0042545
Pral4725g00005 530 PANTHER PECTINESTERASE 14 520 - -
Pral4725g00005 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 179 IPR035513 -
Pral4725g00005 530 NCBIfam pectinesterase inhibitor domain 8 177 IPR006501 GO:0004857
Pral4725g00005 530 CDD PMEI-like_3 37 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4725g00005 Pral-Chr4725 64916 66738 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4725g00005 38 530 Carbohydrate Esterase AT5G51490 54.365 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4725g00005 K01051 - gmx:100806133 632.869