Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4725g00002 ATGAACCACCATCACAACCGATTCAAACCGAACCACCGGTCCGAGTTCCGGAAAATTCTGGTTCAGTTAGCCATGGAACAAGCTCAAGCTATGCATAAGGAAGCACAAGAGTATGGCCCAAAAATTGTGAGCCAAACGCAGAAATACGTGTTCAGTGATTGTTTAAGGCTCTACGATAACAGCGTCTTTCATCTAAACCAAACTCTTCAAGCCTTACATTCTTATGCTTGTTCGTTATTAGATGCACAAACATGGCTTAGTACTGCCCTCACAAACATCGAAACCTGCTATAGCAGCGCGGTGCAGCTCGGAGTCAGAGCGTTCTCGCTTCAAAATAATGTGAGCAGCCACCATGTTAGGAAGATGATAAGCAATGTGTTGGCTGTAAATGGTGAGATTCTGAAGCAAGAGAATAACAACACAAAGAGAAAAGCTCTTGGGTTTATTCCAAGCTGGTTTTCTAGGCACGAAAGGAGGCTTTTGAGCTTGAGTTCATCTTCTTTGAAGGCTAATCTTGTGGTGGCTCAAGATGGTACTGGACATTTTAAGACGGTGCGAGCCGCCATTGATGCAGCATCAAAGAGAACAGTGAAGGCGAGGTTTGTGATACGTGTGAAGAAAGGGGTTTATGAAGAGAATATTCAAGTTGATAAGAATAATGAAAATCTCATGATTGTTGGAGATGGAATGAAACTCACCATTATAACTGGTAGTAAAAGTGTCCAAGATGGAATTACCCCCTCTATGTCTGCAACAGCAGGTATAGATGGTGCCCGCTTCATTGCACGAGACATCACTTTTAGAAACACAGCCGGTCCTGAGAAAGGTCAAGCGGTGGCACTCCGATCAGCCTCCGACCTCTCCGTCTTCTACCGGTGCTCTATCGAAGGATATCAAGACACTCTAATGGCTCATGCTCAGCGTCAATTCTATAGAGATTGCAGAATTTTTGGCACAGTTGATTTCATTTGGGGCAATGCTGCAATTGTTTGGCAAAATTGCACCATTCTTGTGAGAAAGCCCTTACAAGGACAAGGAAACATGATCACGGCTCAAGGGCGAGGTGACCCGTTTCAGAACACCGGAATATCAATAATCAATTCTCGCATTCGAGCCGCGCCGGATCTCAGACCGGTCATAAAATCATATGAAACCTATTTGGGTCGGCCATGGCAGCAATATGCATGAGTTGTTGTCATGAAAACCTACATTGAAGGATTGGTGAATCCATTGGGTTGGTCTCAATGGGGTGATAGTGATTTTGCTCAGGATACGTGTTATTTTGGGGAATATATGAACTATGGGACTGGTTCGTCAACAAAAGATAGGGTTCAATGGCCTGGGTTTCATGTCTTGACGAGCGAGAATGATACACAACAGTTTTCTGTTGCTGGACTTCTTGCTGGTAACACTTGGTTGCCTCAAACCGGTGTGCCTTTTGATATTGACATTTAA 1455 0.4412 MNHHHNRFKPNHRSEFRKILVQLAMEQAQAMHKEAQEYGPKIVSQTQKYVFSDCLRLYDNSVFHLNQTLQALHSYACSLLDAQTWLSTALTNIETCYSSAVQLGVRAFSLQNNVSSHHVRKMISNVLAVNGEILKQENNNTKRKALGFIPSWFSRHERRLLSLSSSSLKANLVVAQDGTGHFKTVRAAIDAASKRTVKARFVIRVKKGVYEENIQVDKNNENLMIVGDGMKLTIITGSKSVQDGITPSMSATAGIDGARFIARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAIVWQNCTILVRKPLQGQGNMITAQGRGDPFQNTGISIINSRIRAAPDLRPVIKSYETYLGRPWQQYAXVVVMKTYIEGLVNPLGWSQWGDSDFAQDTCYFGEYMNYGTGSSTKDRVQWPGFHVLTSENDTQQFSVAGLLAGNTWLPQTGVPFDIDI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4725g00002 484 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 133 IPR035513 -
Pral4725g00002 484 PANTHER PECTINESTERASE 18 474 - -
Pral4725g00002 484 CDD PMEI-like_3 4 135 - -
Pral4725g00002 484 Pfam Pectinesterase 171 469 IPR000070 GO:0030599|GO:0042545
Pral4725g00002 484 NCBIfam pectinesterase inhibitor domain 13 130 IPR006501 GO:0004857
Pral4725g00002 484 Pfam Plant invertase/pectin methylesterase inhibitor 13 128 IPR006501 GO:0004857
Pral4725g00002 484 Gene3D - 168 484 IPR012334 -
Pral4725g00002 484 FunFam Pectinesterase 165 484 - -
Pral4725g00002 484 SUPERFAMILY Pectin lyase-like 167 482 IPR011050 -
Pral4725g00002 484 SMART PMEI_2 3 129 IPR006501 GO:0004857
Pral4725g00002 484 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 13 132 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4725g00002 Pral-Chr4725 39939 42266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4725g00002 10 480 Carbohydrate Esterase AT3G47400 55.230 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4725g00002 K01051 - gmx:100807908 593.193