Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4725g00001 ATGTATATTCCTAATTTAAAACACAAAGTCTCATACAAAAGAACCACATCGATCAAAACACATATAGCATCGAACATTATTGTTAAGCTGTTCTTCTCCCTTGCCTTATTTTCTTCACTTTTCTCAATATCTTCTTCATCAACAACATCATCTTCCTCCATAGATTGGTGGTGCAACCAAACTCCTTACCCTGAGCCATGCAAATACCACATGAACCACCGTCACAACCGATTCAAACCGAACCACCGGTCCGAGTTCAGGAAAATTCTGGTTCAGTTAGCCGTGGAACAAGCTCAAGCTATGCATAAGGAAGCACAAGAGTATGGCCCAAAAATTGTGAGCCAAACGCAGACATACGTGTTCAGTGATTGTTTAAAGCTCTATGATAACACCGTCTTTCATCTAAACCAAACTCTTCAAGCCTTACATTCTTATGCTTGTTCGTTATTAGATGCACAAACATGGCTTAGTACTGCCCTCTCAAACATCGAAACCTGCTGTAGCAGCGCGGTGCAGCTCGGAGTCAGAGTGTTCTCGCTTCAAAATAATGTGAGCAGCCACAATGTTAGGAAGATGATAAGCAATGTGTTGGCTGTAAATGGTGAGATTCTGAAGCAAGAGAATAACAACACAAAGAGAAAAGCTCTTGGGTTTATTCCAAGCTGGTTTTCTTGGCACGAAAGGAGGCTTTTGAGCTTGAGTTCATCTTCTTTGAAGGCTAATCTTGTGGTGGCTCAAGATGGTACTGGACATTTTAAGACGGTGCGAGCCGCCATTGATGCAACATCAAAGAGAACAGTGAAGGCGAGGTTTGTGATACGTGTGAAGAAAGGGGTTTATGAAGAGAATATTCAAGTTGATAAGAATAATGAAAATCTCATGATTGTTGGAGATGGAATGAAACTCACCATTATAATTGGTAGTAAAAGTGTCCAAGATGGAATTACCCCCTCTATGTCTGCAACAGTAGGTATAGATGGTGCCCACTTCATTGCACGAGACATCACTTTTAGAAACACAGCCGGTCCTGAGAAAGGTCAAGTGCTGGCACTCCAATCAGCCTCCGACCTCTCCGTCTTCTACCAGTGCTCTATCGAAGGCTATCAAGATACTCTAATGGCTCATGCACAACGTCAATTCTATAGAGATTGCAGCATTTTTGGCACAGTTGATTTCATTTGGGGCGATGCTGCAATTGTTCTGCAAAATTGCACCATTCTTGTGAGAAAGCCCTTACAGGGACAAGGAAACATGATCACGGCTCAAGGGCGAGGTGACCCGTTTCAGAACACCGGAATATCAATAATCAATTCTCGCATTCGAGCCGCGCCGGATCTCAGACCGGTCGTAAAATCATATGAAACCTATTTGGGTGGGCCATGGCAGCAATATGCACGAGTTGTTGCAATGAAAACCTACATTGAAGGATTGGTGAATCCATTGGGTTGGTCTCAATGGGGTGATAGTGATTTTGCTCAGGATACGTGTTATTTTGGGGAATATATGAACTCTGGGACTGGTTCATCAACAAAAGATAGGGTTCAATGGCCTGGGTTTCATGTCTTGACGAGCGAGAATGATACACAACAGTTTTCTGTTGCTGGACTTCTTGCTGGTAACACTTGGTTGCCTCCAACCGGTGTGCCTTTTGATATTGACATTTAA 1665 0.4294 MYIPNLKHKVSYKRTTSIKTHIASNIIVKLFFSLALFSSLFSISSSSTTSSSSIDWWCNQTPYPEPCKYHMNHRHNRFKPNHRSEFRKILVQLAVEQAQAMHKEAQEYGPKIVSQTQTYVFSDCLKLYDNTVFHLNQTLQALHSYACSLLDAQTWLSTALSNIETCCSSAVQLGVRVFSLQNNVSSHNVRKMISNVLAVNGEILKQENNNTKRKALGFIPSWFSWHERRLLSLSSSSLKANLVVAQDGTGHFKTVRAAIDATSKRTVKARFVIRVKKGVYEENIQVDKNNENLMIVGDGMKLTIIIGSKSVQDGITPSMSATVGIDGAHFIARDITFRNTAGPEKGQVLALQSASDLSVFYQCSIEGYQDTLMAHAQRQFYRDCSIFGTVDFIWGDAAIVLQNCTILVRKPLQGQGNMITAQGRGDPFQNTGISIINSRIRAAPDLRPVVKSYETYLGGPWQQYARVVAMKTYIEGLVNPLGWSQWGDSDFAQDTCYFGEYMNSGTGSSTKDRVQWPGFHVLTSENDTQQFSVAGLLAGNTWLPPTGVPFDIDI 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4725g00001 554 Gene3D - 238 554 IPR012334 -
Pral4725g00001 554 CDD PMEI-like_3 56 205 - -
Pral4725g00001 554 NCBIfam pectinesterase inhibitor domain 30 201 IPR006501 GO:0004857
Pral4725g00001 554 SMART PMEI_2 49 199 IPR006501 GO:0004857
Pral4725g00001 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 202 IPR035513 -
Pral4725g00001 554 SUPERFAMILY Pectin lyase-like 237 552 IPR011050 -
Pral4725g00001 554 Pfam Pectinesterase 241 539 IPR000070 GO:0030599|GO:0042545
Pral4725g00001 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 203 IPR035513 -
Pral4725g00001 554 FunFam Pectinesterase 235 554 - -
Pral4725g00001 554 Pfam Plant invertase/pectin methylesterase inhibitor 53 198 IPR006501 GO:0004857
Pral4725g00001 554 PANTHER PECTINESTERASE 37 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4725g00001 Pral-Chr4725 2514 4958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4725g00001 50 550 Carbohydrate Esterase AT5G51500 53.543 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4725g00001 K01051 - gmx:100807908 629.402