Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4722g00003 ATGGCTTTCATGGTCGGCGATCGGCAATCCAACTTTAAGCACTTCTGCAAAATCTGCAAGAAAGGGTTTGGCTGTGGCAGAGCTCTCGGAGGCCACATGAGGGCTCACGGCATCGGAGACGAAGGCGGCGGCATGGACGACGATGACGACCCGGCCAGCGACTGGGAAGACAGCAACAAGCTTGGTGGAGATTCTAATGTTTCTCCCTCCAACAAACGAATGTACGCCTTGAGGACGAACCCTAATCGGTTCAAGAGTGTTAGGATTTGTGAGAATTGTCGTAAAGAGTTCTTCTGTTGGAAATCCTTCCTTGAACATGGTAAATGCACTTCCGACGACCCCGATGAGTCGTTCGTCTCGTCGCCGGGCTCGGACGGCGACGATATGTCAGGTCGGAGAGGTTGTGGTTGGTCTAAGAGGAAGAGGTCTTTTCGAGCCAAAGTGGGAAGCTTCAATAATAACCCTAATTATTCACCATCCAATGAAGACGAAGACCTCGCTAACTGTTTAATGATGCTGTCAAACGCCGCCGTGGATCCTCTCGATGAATCTTCTGCGTTCGCGAGCAAAGACGAAGATAGAAGAAACCCTAATCTGAGCTTCATGGCTCCAATGTCCCAAATCTCTTCAGATCATAACAAAGCCAAAGAGGGAGGCGGCAATAATATTAATCATAAGGGTTTGTTTGAATGCAAAGCATGCAAGAAAGTGTTCAATTCGCATCAAGCATTGGGTGGTCACAGAGCCAGCCACAAGAAAGTCAAAGGTTGCTTCGCGGCTCGGCTAGACAACCTCGACGACTCCGGCACCGGCGCTGACGATGACGTCATCACCCATGAAGACCAACTCTTCCCGACCAACAAATCCAACAACAATTCAGCCCTTCACTTCGATCAAGGGTCCAACAATAATAACGCCTCATCAATGGCGTCGTCCTCTAAGAGGAAATCCAAAGTCCATGAATGCTCCATATGCCACCGCGTTTTCTCATCTGGACAAGCACTGGGAGGACACAAGAGGTGTCATTGGATTACATCAAACGCACCAGACACCTCGGCGCTGGCTAGATTTCAGCAATTTCAAGAACAAATAGAACAACACATGACCAATAATAATCAAGTTATGGCAAAGTTTGACGACTCTGATCAGCCAATTGATCTCAAGCTCGATCTCAACCTCCCAGCTCCGTCGCGCAATGTCTCAACGGAAATCTACTTACAGTCATGGGTCGGTGGTGGCAGTGGAGGAGTGGTGAAAGAACATAAAGATGACAAAAGTCAAAGTCTTCATCGTCGTCAAGAAATGGACAATGAGAATAATAATGATGAAGAATGCAAGAACAGTAACAAAAACCTTAACGCTAGCAGTGGTTCAACCATGCCAAACGTGGAAGATGACGAAGCTGAGAGTAAGGTGAAGTTAGCGAAACTAAGTGAACTAAAGGACATGAACGTAGGAGGGAGTTCCTCGCCATGGTTACAGGTGGGAATCGGTTCCAGTACAACTACTACTGATGTCGGAACTGACCCATAA 1533 0.4775 MAFMVGDRQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDEGGGMDDDDDPASDWEDSNKLGGDSNVSPSNKRMYALRTNPNRFKSVRICENCRKEFFCWKSFLEHGKCTSDDPDESFVSSPGSDGDDMSGRRGCGWSKRKRSFRAKVGSFNNNPNYSPSNEDEDLANCLMMLSNAAVDPLDESSAFASKDEDRRNPNLSFMAPMSQISSDHNKAKEGGGNNINHKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLDDSGTGADDDVITHEDQLFPTNKSNNNSALHFDQGSNNNNASSMASSSKRKSKVHECSICHRVFSSGQALGGHKRCHWITSNAPDTSALARFQQFQEQIEQHMTNNNQVMAKFDDSDQPIDLKLDLNLPAPSRNVSTEIYLQSWVGGGSGGVVKEHKDDKSQSLHRRQEMDNENNNDEECKNSNKNLNASSGSTMPNVEDDEAESKVKLAKLSELKDMNVGGSSSPWLQVGIGSSTTTTDVGTDP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4722g00003 510 PANTHER OS02G0659100 PROTEIN 7 503 - -
Pral4722g00003 510 SMART c2h2final6 229 251 IPR013087 -
Pral4722g00003 510 SMART c2h2final6 320 342 IPR013087 -
Pral4722g00003 510 SMART c2h2final6 14 36 IPR013087 -
Pral4722g00003 510 Pfam C2H2-type zinc finger 319 344 - -
Pral4722g00003 510 Pfam C2H2-type zinc finger 229 253 - -
Pral4722g00003 510 Pfam C2H2-type zinc finger 14 36 - -
Pral4722g00003 510 ProSitePatterns Zinc finger C2H2 type domain signature. 231 251 IPR013087 -
Pral4722g00003 510 ProSitePatterns Zinc finger C2H2 type domain signature. 322 342 IPR013087 -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 283 313 - -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 483 510 - -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 446 463 - -
Pral4722g00003 510 SUPERFAMILY beta-beta-alpha zinc fingers 228 342 IPR036236 -
Pral4722g00003 510 ProSitePatterns Zinc finger C2H2 type domain signature. 16 36 IPR013087 -
Pral4722g00003 510 ProSiteProfiles Zinc finger C2H2 type domain profile. 320 342 IPR013087 -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 415 471 - -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 39 72 - -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 417 445 - -
Pral4722g00003 510 Gene3D Classic Zinc Finger 226 342 - -
Pral4722g00003 510 ProSiteProfiles Zinc finger C2H2 type domain profile. 229 256 IPR013087 -
Pral4722g00003 510 MobiDBLite consensus disorder prediction 109 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4722g00003 Pral-Chr4722 33976 35508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4722g00003 106 345 C2H2 Transcription Factor Family AT1G02040 36.626 3.75e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4722g00003 - - jre:109015950 548.125