LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4721g00018	ATGACATCAATAACTCGCCCAGGATTTTCTCACTGTAAAAACTTGAGCGCCACCAACTTAAGAGGACAAATAGCTGCTTCATTTTCGCAACTTATAGAGTTAGAATACTTGGATTTATCAAGCAATGGCCTGTCAGGACCGATACCGGAATTTCTTGCTAAATTGCCAAAGCTGAGAATCCTTAACTTGAGTGGCAACAAGCTTACAGGTTCAATTCCCAAGGCTCTTAAAGAAAATTCAGATTTGAAAACGAGTTTGGACGATAATCCTGGCCTCTGTTTGAGGGATCCATGGAAGAAGAAAAAGCACAAATTCCCTATTCTATTAATTGTATCTGTTTCAGCTTCGACGGTCTTCCGAAAACCCCTATTAACATTTGCAGTGGATTCTACTGTTTCAACAAATCAAGAAGCATGGGAATATTTAAGAAATCGTGCTTTTTCTTACTCAGAGGTTCTTGAAATCACTAATAACTTCCAAAACTTGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTAGGCACTCTTAAGGATAATACTCAGGTTGCAGTGAAGTTACTTTCTCAGTCATCAAGGCAAGGTCATAAAGAATTTCGATCAGAGGTAGAACTTTCGATTGTTGTTCATCATAAACACTTGGTTTGTCTGATTGGATACTGTGAAGAGAGTGGTGCTAGGGCATTAATTTACGAGTACATGGCTAATGGTGACCTCCAGCAACATTTGACAGAGAAAAATTCAAAAGTTTTAAGGTGGGACGAGAGGCTTCAAGTTGCTATAGATGTAGCAAAAGGTCTGGAATATCTCCATATTGGTTGTAAAACTCCTATAATCCACAGAGACTTAAAACCATCAAACATTTTATTAAATAAGCATATGGTAGCTAAGATTGCTGATTTTGGATTATCCAGAGCATTTGAAAATGAAATGGATTCTCATCTATCAACTCGACCAGCTGGTACACCTGGTTTTATTGATCCTGAATTTCACAGGTCTGGAAACCTAAACCAAAAAAGTGATGTCTATAGTTTTGGAATGATTCTTCTCCAATTAATCACTGGCCACCCGCCAATAAGAAGGGAACTTGAGGATATATGTTTTATTATTGATTGGATCCGTCCAAAAATTGAGTGTAGGGATATCCAAGGCATTGTTGATCTAAGGCTGGCGGGTGAATTCAATGTTAGTTCTGCATGGAAAGCTGTGGAGACAGCAATGTCTTGCATTGCGCCACTGTCTACTCAAAGGCCAGACATTAGTTCTGTGTTGCGTGAACTAAAGGAATGTTTAGCTATGGAGATTGGTCACACCAATTCAAATGGCGTACCAAGCCATCAAATCAATCATTCTGGACAGCTTGATCCAATCACTACCCTCTCAGCTAGGTAA	1389	0.3895	MTSITRPGFSHCKNLSATNLRGQIAASFSQLIELEYLDLSSNGLSGPIPEFLAKLPKLRILNLSGNKLTGSIPKALKENSDLKTSLDDNPGLCLRDPWKKKKHKFPILLIVSVSASTVFRKPLLTFAVDSTVSTNQEAWEYLRNRAFSYSEVLEITNNFQNLIGEGGFGKVYLGTLKDNTQVAVKLLSQSSRQGHKEFRSEVELSIVVHHKHLVCLIGYCEESGARALIYEYMANGDLQQHLTEKNSKVLRWDERLQVAIDVAKGLEYLHIGCKTPIIHRDLKPSNILLNKHMVAKIADFGLSRAFENEMDSHLSTRPAGTPGFIDPEFHRSGNLNQKSDVYSFGMILLQLITGHPPIRRELEDICFIIDWIRPKIECRDIQGIVDLRLAGEFNVSSAWKAVETAMSCIAPLSTQRPDISSVLRELKECLAMEIGHTNSNGVPSHQINHSGQLDPITTLSAR	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4721g00018	462	CDD	STKc_IRAK	163	428	-	-
	Pral4721g00018	462	SMART	serkin_6	157	430	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4721g00018	462	Pfam	Protein tyrosine and serine/threonine kinase	159	373	IPR001245	GO:0004672\|GO:0006468
	Pral4721g00018	462	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	277	289	IPR008271	GO:0004672\|GO:0006468
	Pral4721g00018	462	MobiDBLite	consensus disorder prediction	440	462	-	-
	Pral4721g00018	462	Gene3D	Transferase(Phosphotransferase) domain 1	233	443	-	-
	Pral4721g00018	462	PRINTS	Leucine-rich repeat signature	34	47	-	-
	Pral4721g00018	462	PRINTS	Leucine-rich repeat signature	55	68	-	-
	Pral4721g00018	462	FunFam	Leucine-rich repeat receptor-like protein kinase	130	232	-	-
	Pral4721g00018	462	Pfam	Leucine rich repeat	15	68	IPR001611	GO:0005515
	Pral4721g00018	462	ProSitePatterns	Protein kinases ATP-binding region signature.	163	185	IPR017441	GO:0005524
	Pral4721g00018	462	ProSiteProfiles	Protein kinase domain profile.	157	430	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4721g00018	462	FunFam	Leucine-rich repeat receptor-like kinase	8	94	-	-
	Pral4721g00018	462	PANTHER	OS07G0107800 PROTEIN-RELATED	14	430	-	-
	Pral4721g00018	462	SUPERFAMILY	Protein kinase-like (PK-like)	134	426	IPR011009	-
	Pral4721g00018	462	Gene3D	Ribonuclease Inhibitor	2	104	IPR032675	-
	Pral4721g00018	462	SUPERFAMILY	L domain-like	14	83	-	-
	Pral4721g00018	462	Gene3D	Phosphorylase Kinase; domain 1	129	232	-	-
	Pral4721g00018	462	FunFam	Lectin-domain containing receptor kinase A4.3	233	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4721g00018	Pral-Chr4721	461335	475403	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4721g00018	14	454	Receptor kinase-like Gene Family	AT1G51830	43.376	1.16e-127	384

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Pral4721g00018		PK_Tyr_Ser-Thr	2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4721g00018	-		-	pcin:129289942	572.778