Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4721g00005 ATGGCAACAGCTGATTCAGATGCTCCTCCAATCTTAAATGCCTACGAAATTTATGAAGCCATCTCACAACCTGATTCTCCTACGGCAACACAAGATGTTGATGCCATGTTGGAAATAAAGCATACTTATGGGATCTCTAGAATTAGTTGGCAAGGGGACCCATGTGTTCCATCTAAATTAGCATGGGATGGCCTGATTTGCAGCTCCGAAAATAATATAAGGATCCTTTCATTGAACTTGAGCTCAAGCAGCCTCAAAGGTGAAATAAGTGAATCGTTTGCTAAATTATTAAAATTGGAGTCATTGGATTTGTCAAATAATGAACTGATTGGACAACTACCAGAGTTTCTCTCAACTCTTCCGAATTTGAAGTTCATTAATTTAGCAGGAAACAAGCTCACTGGTTTAATTCCCAAGGCTTTGAAGGAAAATGCTGGATTGCAGCTAAGTGTGGCCAACAATCCAGGTCTTTGCCAAAAGAGTTCCTGCAAAAAACACAATTTTGTAATTCCACTTATTGCATCAGTTGCGGCTTTGGTCATCCTAACTGTTATTGTTGCCCTGGTGATCTGGAGATTTAGACATAAAAGAGTCATCCTAAGTGAATTTCAAAAAAGGGAAGCTGCAAAAGATAACAATCAATCATTTTCTTACACGGAGGTACTCCGTATCACAAACAATTTAGAAACTGCTATTGGAGAAGGAGGGTTTGGAAAAATTTACCTTGGTACTTTAGAAGATGGCACAAAGGTTGCTGTTAAGCTACTTTCTCCATCTTCAAGGCAAGGCTATAAGGAATTTCAATCAGAGGCTCAACTCTTAACAGTCATTCATCATAGAAACTTGGTTTCACTAGTTGGGTTTTGTGATGAAAACGACATCAAAGCGTTGGTTTATGAATATATGGATCTTGGAGACCTCAGCGGACTATTGTCAGAGAAAAACTCAAAAGTTTTAAAGTGGAATGAGAGACTTCAAGTTAGTATAGATGCAGCAAGAGGACTGGAATATCTTCATCATGGTTGTAAGACTCCCATAATTCATAGAGACTTAAAACCATCCAATATTCTGTTAAATCAGTCCATGGTAGCCAAGCTTGCTGATTTTGGATTATCAAGAGCATTTAAAAATGAAAGAGATACTCATCTATCAACTCAACCAGCTGGTACGCCTGGTTTTATTGATCCTGAATTTCAAAAGTCCGGAAACCTAAACAAAGAAAGTGACATCTATAGTTTTGGGATGATTCTTCTTCAACTTATCACAAGCCATCCACCGGTGAGAAGAGAACTTGAGGATATATGTTTCATCATTGATTGGATTCGTCCAAAAATTGAATGTGGGGATATCCAAGGCATTGTTGACCTAAGGTTGGCAGGTGAATTCAATGTTTGTTCCGCATGGAAGGCTGTGGAGACAGCAATGTCATGCATTGCACCACAGCGCACCCAAAGGCCAGACATTAGTTATGTGTTGCTTGAACTAAGGGAATGTTTAGCTATGGAGATTGGTCTTTCGAATTCAAATGGTATACCAAGCCATCCAATCAATCATTCTGGGAATCTTGATTCAATCACCCTCCCCTCAGCTAGGTAG 1596 0.3922 MATADSDAPPILNAYEIYEAISQPDSPTATQDVDAMLEIKHTYGISRISWQGDPCVPSKLAWDGLICSSENNIRILSLNLSSSSLKGEISESFAKLLKLESLDLSNNELIGQLPEFLSTLPNLKFINLAGNKLTGLIPKALKENAGLQLSVANNPGLCQKSSCKKHNFVIPLIASVAALVILTVIVALVIWRFRHKRVILSEFQKREAAKDNNQSFSYTEVLRITNNLETAIGEGGFGKIYLGTLEDGTKVAVKLLSPSSRQGYKEFQSEAQLLTVIHHRNLVSLVGFCDENDIKALVYEYMDLGDLSGLLSEKNSKVLKWNERLQVSIDAARGLEYLHHGCKTPIIHRDLKPSNILLNQSMVAKLADFGLSRAFKNERDTHLSTQPAGTPGFIDPEFQKSGNLNKESDIYSFGMILLQLITSHPPVRRELEDICFIIDWIRPKIECGDIQGIVDLRLAGEFNVCSAWKAVETAMSCIAPQRTQRPDISYVLLELRECLAMEIGLSNSNGIPSHPINHSGNLDSITLPSAR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4721g00005 531 Gene3D Ribonuclease Inhibitor 31 158 IPR032675 -
Pral4721g00005 531 FunFam Leucine-rich repeat receptor-like kinase 31 160 - -
Pral4721g00005 531 FunFam Leucine-rich repeat receptor-like protein kinase 204 301 - -
Pral4721g00005 531 SMART serkin_6 226 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4721g00005 531 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
Pral4721g00005 531 CDD STKc_IRAK 232 495 - -
Pral4721g00005 531 Gene3D Transferase(Phosphotransferase) domain 1 303 507 - -
Pral4721g00005 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Pral4721g00005 531 SUPERFAMILY L domain-like 57 148 - -
Pral4721g00005 531 ProSiteProfiles Leucine-rich repeat profile. 98 121 IPR001611 GO:0005515
Pral4721g00005 531 Pfam Protein tyrosine and serine/threonine kinase 228 426 IPR001245 GO:0004672|GO:0006468
Pral4721g00005 531 Gene3D Phosphorylase Kinase; domain 1 232 302 - -
Pral4721g00005 531 PANTHER OS07G0107800 PROTEIN-RELATED 2 499 - -
Pral4721g00005 531 ProSiteProfiles Protein kinase domain profile. 226 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4721g00005 531 SUPERFAMILY Protein kinase-like (PK-like) 212 494 IPR011009 -
Pral4721g00005 531 FunFam Os07g0541700 protein 306 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4721g00005 Pral-Chr4721 112363 118058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4721g00005 1 531 Receptor kinase-like Gene Family AT1G51850 43.463 1.03e-151 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4721g00005 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4721g00005 - - pcin:129289942 775.007