Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4720g00007 ATGTTACACGCTGCTAAAAAGAACTTATGCTATTTTGGGTTTCCCAATGATCAGAGGACTGGAAAAATACGGCACCGAAGGAAACGATCCATTGACGTGGACAATGAAAAACTCCAAAATGAGTTTAACCATGACGCTGCTCCTTTTGGGGATGCCAATATCCACTCAGTCACTGATGTCCAAGATTCACCTTCCACTTCACAACAAGTACAGGGTGCCGCATTTGGGCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCACTACGGGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGTGTTCGAGCAAGGCGTGTGCGCATAGCCTTAGAAAGTCAATCAGCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAGAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATACGCTCTGGCACATCAGTGGCAGGCGGCATCAAGACAGCAGGCTGCTTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTGTGTGAAAATGGAGCAGTGGAGGGTAAAAATGAAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCGGTTCTGCCAAGTATTAGTCCAAACCTTACCAGTCAGAAAACCGGGCCATCATTATCTGATGGTTGTGACTCTTCACCTAGCAAGTCTGCTGGTTTGCTGGAGGCATCAAAACCGCAGATTAAGACGAAATCTAATGCAAATGTTGCAACTGAAGAAGCCAACTCAAAACCTGGGCTTAGTTCGAGATCTCATAGTAATCCGAAGGAGCGAACCACACAAGCTGATAAACAGGCAAAAAAAAGATTATCTCTGCCTAACAATGCAGGGGGAGGCGCCGGAGCTCAAACAGCCAAAAATCCTGCCAGAACTAATGTGAAGGGGGCAATCAGCACTCAAAAAGCTGTTCGTGACAAGCCTAAGCTCAGTGGAAGAGGCGATGTGAATTCAACAAAAACTGTTCCTCAACACGCAGAAATGTAA 1272 0.4591 MLHAAKKNLCYFGFPNDQRTGKIRHRRKRSIDVDNEKLQNEFNHDAAPFGDANIHSVTDVQDSPSTSQQVQGAAFGHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKLQQQLANEARVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGKNEIRSQLRSASKKSVLPSISPNLTSQKTGPSLSDGCDSSPSKSAGLLEASKPQIKTKSNANVATEEANSKPGLSSRSHSNPKERTTQADKQAKKRLSLPNNAGGGAGAQTAKNPARTNVKGAISTQKAVRDKPKLSGRGDVNSTKTVPQHAEM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4720g00007 423 PANTHER IQ-DOMAIN 5-RELATED 54 374 - -
Pral4720g00007 423 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
Pral4720g00007 423 MobiDBLite consensus disorder prediction 278 351 - -
Pral4720g00007 423 MobiDBLite consensus disorder prediction 409 423 - -
Pral4720g00007 423 MobiDBLite consensus disorder prediction 373 394 - -
Pral4720g00007 423 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Pral4720g00007 423 FunFam IQ-domain 11 81 132 - -
Pral4720g00007 423 MobiDBLite consensus disorder prediction 275 423 - -
Pral4720g00007 423 Gene3D - 82 124 - -
Pral4720g00007 423 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Pral4720g00007 423 SMART iq_5 81 103 IPR000048 GO:0005515
Pral4720g00007 423 SMART iq_5 104 125 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4720g00007 Pral-Chr4720 34670 40699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4720g00007 22 402 IQD Protein Family AT3G22190 59.481 3.79e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4720g00007 - - qsa:O6P43_000537 491.886