Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4720g00006 ATGTTACACGCTGCTAAAAAGAACTTATGCTATTTTGGGTTTCCCAATGATCAGAGGACTGGAAAAATACGGCACCGAAGGAAACGATCCATTGACGTGGACAATGAAAAACTCCAAAATGAGTTTAACCATGACGCTGCTCCTTTTGGGGATGCCAATATCCACTCAGTCACTGATGTCCAAGATTCACCTTCCACTTCACAACAAGTACAGGGTGCCGCATTTGGGCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCACTACGGGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGTGTTCGAGCAAGGCGTGTGCGCATAGCCTTAGAAAGTCAATCAGCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAGAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATACGCTCTGGCACATCAGTGGCAGGCGGCATCAAGACAGCAGGCTGCTTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTGTGTGAAAATGGAGCAGTGGAGGGTAAAAATGAAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCGGTTCTGCCAAGTATTAGTCCAAACCTTACCAGTCAGAAAACCGGGCCATCATTATCTGATGGTTGTGACTCTTCACCTAGCAAGTCTGCTGGTTTGCTGGAGGCATCAAAACCGCAGATTAAGACGAAATCTAATGCAAATGTTGCAACTGAAGAAGCCAACTCAAAACCTGGGCTTAGTTCGAGATCTCATAGTAATCCGAAGGAGCGAACCACACAAGCTGATAAACAGGCAAAAAAAAGATTATCTCTGCCTAACAATGGGGGAGGCGCCGGAGCTCAAACAGCCAAAAATCCTGCCAGAACTAATGTGAAGGGGGCAATCAGCACTCAAAAAGCTGTTCGTGACAAGCCTAAGCTCAGTGGAAGAGGCGATGTGAATTCAACAAAAACTGTTCCTCAACACGCAGAAATGTAA 1269 0.4586 MLHAAKKNLCYFGFPNDQRTGKIRHRRKRSIDVDNEKLQNEFNHDAAPFGDANIHSVTDVQDSPSTSQQVQGAAFGHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKLQQQLANEARVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGKNEIRSQLRSASKKSVLPSISPNLTSQKTGPSLSDGCDSSPSKSAGLLEASKPQIKTKSNANVATEEANSKPGLSSRSHSNPKERTTQADKQAKKRLSLPNNGGGAGAQTAKNPARTNVKGAISTQKAVRDKPKLSGRGDVNSTKTVPQHAEM 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4720g00006 422 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
Pral4720g00006 422 PANTHER IQ-DOMAIN 5-RELATED 54 374 - -
Pral4720g00006 422 MobiDBLite consensus disorder prediction 278 351 - -
Pral4720g00006 422 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Pral4720g00006 422 FunFam IQ-domain 11 81 132 - -
Pral4720g00006 422 Gene3D - 82 124 - -
Pral4720g00006 422 MobiDBLite consensus disorder prediction 372 393 - -
Pral4720g00006 422 MobiDBLite consensus disorder prediction 408 422 - -
Pral4720g00006 422 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Pral4720g00006 422 SMART iq_5 81 103 IPR000048 GO:0005515
Pral4720g00006 422 SMART iq_5 104 125 IPR000048 GO:0005515
Pral4720g00006 422 MobiDBLite consensus disorder prediction 275 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4720g00006 Pral-Chr4720 34670 40704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4720g00006 22 401 IQD Protein Family AT3G22190 59.635 7.50e-125 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4720g00006 - - qsa:O6P43_000537 501.901