Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4718g00004 ATGGCGAATGGAGAAGAAAAAGGCAATGACTTCTATGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAGGCAATTCAGCAAGCCTATTCCGTTTTATCTGATGCGAATAAGCGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACATTGGGATGGGAGATTTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAGAGAGCTTTGAGGAGTTGCAACAACTGTTTGAAGATATGTTTCAAAGTGACATTGGATGTTCTGGAAGTGACTCCCACACTGCTGCTTCTTGTTCTGCATCATCTACGTGGATCGGCTACAAGACATAAAGAAGGGAGGGGAGGAGGAGGAGTACGAGGAACAGGTAGCAGTAAGCGAAGACATGGTAGGAAACAAAGGTTGCATCTGGGCATGATGTTTCCTCCAATGACATCTCCGGTATTTCGGCATAGTCACCACCTCGTTGGCCATATGCTTCTCACCAATCTGGGGATTTTGGAACGATTCACTGATATTCTTAACCTGACTCTCTCAAAGCTGAACTGTGATTGA 687 0.4469 MANGEEKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGDFLNEMAAMMSQTKPNENGERALRSCNNCLKICFKVTLDVLEVTPTLLLLVLHHLRGSATRHKEGRGGGGVRGTGSSKRRHGRKQRLHLGMMFPPMTSPVFRHSHHLVGHMLLTNLGILERFTDILNLTLSKLNCD 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4718g00004 228 CDD DnaJ 10 70 IPR001623 -
Pral4718g00004 228 Pfam DnaJ domain 10 78 IPR001623 -
Pral4718g00004 228 PANTHER PUTATIVE, EXPRESSED-RELATED 2 117 - -
Pral4718g00004 228 SMART dnaj_3 9 73 IPR001623 -
Pral4718g00004 228 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Pral4718g00004 228 Gene3D DnaJ domain 1 84 IPR036869 -
Pral4718g00004 228 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pral4718g00004 228 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pral4718g00004 228 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pral4718g00004 228 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pral4718g00004 228 MobiDBLite consensus disorder prediction 152 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4718g00004 Pral-Chr4718 23090 27389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4718g00004 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 1.53e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4718g00004 - - tcc:18596282 188.348