Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4717g00017 ATGTCGAAATTCCCCGACCTTGCGGTGGATGGCCGGAGGCTCGGCAAGGCGCCGGAGAGGTCCAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTTTTGAAAGAGAAGCGAGGGTCTGGATCTTTAAGCATAGGGATGGCTGGAAAAATGGAATCTAGAGCAATTACGAAGGACTCCAAGAGAAACCTGGAAAATCCTGATGATACATTGGGATTAAATGCTTCAGCTATGGAATGTCTTCCGCAGTTCGTGGAAAACGCCTGCATCAAGAAGTCTGATTCGAGGTCAGACCCTGAACCGCAATTGACGATATTTTATGCCGGAAAAGTGCTAGTGTTTGATGCTTTTGCTCCTGAGAAGGCCACAGAGATCATGGAACTAGCCACCAAATTAAGCTCTCATAGTACTGTTTCAGACATTAACAAGAACCTCCCAAGTGCTTCCACTGCTAAAGAAAATAAGGATGGGGCCAACGGGCCTCAAAACAACACTGCTCAGGAACAGGCAGTCCCTAAACCTGGACCCGCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCATCGCTTCTGAAATTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAACAGTCCAAATAATCCAAAGCCGGATGGAAGCAGTTCGGGAGGAGACGCTGATCAGGGCCAGTCTTCCAAATCATTTGACCTTAACATGTAG 723 0.4661 MSKFPDLAVDGRRLGKAPERSNFTQYCNVLSQLLKEKRGSGSLSIGMAGKMESRAITKDSKRNLENPDDTLGLNASAMECLPQFVENACIKKSDSRSDPEPQLTIFYAGKVLVFDAFAPEKATEIMELATKLSSHSTVSDINKNLPSASTAKENKDGANGPQNNTAQEQAVPKPGPAPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNSPNNPKPDGSSSGGDADQGQSSKSFDLNM 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4717g00017 240 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Pral4717g00017 240 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 216 IPR040390 -
Pral4717g00017 240 MobiDBLite consensus disorder prediction 208 240 - -
Pral4717g00017 240 MobiDBLite consensus disorder prediction 132 186 - -
Pral4717g00017 240 MobiDBLite consensus disorder prediction 132 170 - -
Pral4717g00017 240 Pfam tify domain 101 129 IPR010399 -
Pral4717g00017 240 SMART tify_2 96 131 IPR010399 -
Pral4717g00017 240 MobiDBLite consensus disorder prediction 203 240 - -
Pral4717g00017 240 Pfam Jas motif 187 209 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4717g00017 Pral-Chr4717 149719 152627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4717g00017 9 224 Tify Gene Family AT1G19180 34.921 1.88e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral4717g00017 tify 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4717g00017 K13464 - gmx:100778559 236.884