Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00067 ATGTCCTCTCACGAGCAAGCCCTAGTATCCCTTTTTTCCCAGCTAGCCTTGTCCTTCGACGGCGCCATTTTGGGTCTCGCCTTGGCCTATGCCGCTGTTCGGTCCGTCCTCAAACTTACTGCTAACTCCGCCGCGCTCGACAAGCTCAGCGTCGCCCCTACTGTCTCCGTTTCTGACCTCCGGTCACTTCTGGACAGTTCCGACGCTGACGGCGATTCCCAAGGTTGCGACAAACTCGTTATTGTCCGTGGCACTGTCGAGGCCAAGTCTGCCGTTGAGAGCGGCTGGAAAAGCTTAAGATCTAGTGTGTTAGTTTCTCGCGAGTCTGGCGATAACGCTGTGGTTATTCAGAGAACTCAAACGTGTATATATACTGAATGGAAGGGCTTCTTCGGTTGGACTTCTGATCTCCGAGCCTTATTTGCTCGAAATTTGAGGCAGCAAGAATCTACATCTTTAAGAACGGTTCCCTTTGTTCTCGTTGATGGTGGACGGCGACCTCATGGTGATTATGTTGTTGTCAATTTGGAAGGCTCAAGGCATCCCTTACCTCTTACTACAGTTTATCATAAATTGCAACCGATAAATGCTTCTCCTTACACATTCTTACAGGCACTTTTTGGACATGAGTATCCAGTTGGGCTGCTGGATGAAGAGAAAATTCTGCCTTTGGGAAAGGATATCAGCGCTGTTGGCATGTGCTATTTTAGAAATGGAATTGCTGAAATTAAGTCATGCAAAGAGCTGCCATATTTTCTGTCTGAAATGAGCAAAGATCAGATGATTGTGGAGCTTAAATTTAAAACAAAGGTACTTTTTTGGAGTGGTATCATTCTGGGTTCACTGTCAGTGGGCATTCTTGGTTATGCTTTCGTGAGAAACTGGAACAGATGGAAACAATGGAGGCACCAGAGGCAGGCTCAGCAGCAAGGGCAAACCAACTATGATAATGCTGAATTTGAGATTTTAGACAATGAGATGGAAGAGGTTCCGGATGGACAGTTATGCGTTATATGCCTGATGAGGAGAAGGCGTTCTGTGTTTATTCCCTGTGGGCATCTTGTGTGTTGCCAAGGGTGTGCCATATCAGTTGAGCGCGAAGTGGCACCTAAGTGTCCTGTTTGTAGGCAGGAAATTCGCAATTCAGTGCGGATATTTGAATCATGA 1167 0.467 MSSHEQALVSLFSQLALSFDGAILGLALAYAAVRSVLKLTANSAALDKLSVAPTVSVSDLRSLLDSSDADGDSQGCDKLVIVRGTVEAKSAVESGWKSLRSSVLVSRESGDNAVVIQRTQTCIYTEWKGFFGWTSDLRALFARNLRQQESTSLRTVPFVLVDGGRRPHGDYVVVNLEGSRHPLPLTTVYHKLQPINASPYTFLQALFGHEYPVGLLDEEKILPLGKDISAVGMCYFRNGIAEIKSCKELPYFLSEMSKDQMIVELKFKTKVLFWSGIILGSLSVGILGYAFVRNWNRWKQWRHQRQAQQQGQTNYDNAEFEILDNEMEEVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRNSVRIFES 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00067 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 388 IPR013083 -
Pral4715g00067 388 ProSiteProfiles Zinc finger RING-type profile. 336 376 IPR001841 -
Pral4715g00067 388 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 1 388 IPR044247 GO:0004842
Pral4715g00067 388 FunFam Baculoviral IAP repeat containing 7 345 386 - -
Pral4715g00067 388 SUPERFAMILY RING/U-box 328 382 - -
Pral4715g00067 388 SMART ring_2 336 375 IPR001841 -
Pral4715g00067 388 CDD RING-HC_SPL2-like 331 377 - -
Pral4715g00067 388 Pfam Zinc finger, C3HC4 type (RING finger) 334 381 - -
Pral4715g00067 388 Pfam E3 Ubiquitin ligase 141 286 IPR022170 GO:0004842|GO:0006996|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00067 327 385 C3H Transcription Factor Family AT3G06140 37.288 1.08e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00067 K15688 - gmx:100800058 548.51