Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00064 ATGATGAATACTGCAAGAAATAGGCCTCCTTTCACAGCTTCTCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAATACATGGTCTCAGGGACACCGATCCCACCTGATCTCATTTACTCCATCAAAAGAAGCCTAGACTCATCAATATCTTCAAGGCTTTTTACTCACCATCCCGGTGTGGGATGGGGATGTTTTGAGATGGGTTTTGGGAGAAAAATTGACCCAGAGCCAGGAAGGTGCAGAAGAACAGACGGCAAGAAATGGAGATGCTCAAAGGAAGCATACCCAGATTCAAAATACTGTGAAAAACACATGCACAGAGGAAGAAACCGTTCAAGAAAGCCTGTGGAAGTTCCTTCATCAACAAGCAGCATTACCACAAACACCTCGCAAGCAATCTCATCATATAGCCTTAACAGAGGCCTTTCCATGATGAGCAACAACCCAAACAACAACACCCCCTCAATCTCTTCTTCTTTCCCTTTCTCTGAATCATCATCCCAGTATCCTTACCAAAATTCTTCTCTTAATCCCTTCTTTTACACCAACTCAACCTCTACGAGACCTCCTGATTCTGATTTCTCATCTCATAGCAACACTACCCATCAGCTATTTTTGGACTCTGGATCTTATTCCCAGGACGAGAAAGACTACAGAAATATTCATGTGGACGAAAGGGCATTTTTCCCAGAAGCTTCAGGGTCAGCTAGAGGCTTCCCTGACTCGTACCACCAATTATCTATGGGCTCCTACAATAAATCCTATTCAAACTCTCACCAGTTTCAAAGCCTCAATGATAATGACAGTAATCCAAGGCAACAAGAAGAAGAGCAACATTGTTTTATTCTAGGCACTGACTTCAAATCACCCAGACCAGGCAAAAGCGAGAAAGACACTGGTACTGAAACTACCCAGAGACCACTTCACCACTTCTTTGGGGATCAGTGGACTCAAAAGAACACGGATTCTTGGCTTGATCTTGCTTCCAACTCCAGAATTCCCACAGATGAATGA 1020 0.4343 MMNTARNRPPFTASQWQELEQQALVFKYMVSGTPIPPDLIYSIKRSLDSSISSRLFTHHPGVGWGCFEMGFGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVPSSTSSITTNTSQAISSYSLNRGLSMMSNNPNNNTPSISSSFPFSESSSQYPYQNSSLNPFFYTNSTSTRPPDSDFSSHSNTTHQLFLDSGSYSQDEKDYRNIHVDERAFFPEASGSARGFPDSYHQLSMGSYNKSYSNSHQFQSLNDNDSNPRQQEEEQHCFILGTDFKSPRPGKSEKDTGTETTQRPLHHFFGDQWTQKNTDSWLDLASNSRIPTDE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00064 339 PANTHER GROWTH-REGULATING FACTOR 5 9 325 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral4715g00064 339 Pfam QLQ 10 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4715g00064 339 MobiDBLite consensus disorder prediction 104 202 - -
Pral4715g00064 339 MobiDBLite consensus disorder prediction 252 271 - -
Pral4715g00064 339 MobiDBLite consensus disorder prediction 292 306 - -
Pral4715g00064 339 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4715g00064 339 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4715g00064 339 Pfam WRC 77 119 IPR014977 -
Pral4715g00064 339 MobiDBLite consensus disorder prediction 252 317 - -
Pral4715g00064 339 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Pral4715g00064 339 MobiDBLite consensus disorder prediction 117 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4715g00064 Pral-Chr4715 268363 270513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00064 8 320 GRF Transcription Factor Family AT3G13960 39.295 1.98e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral4715g00064 WRC 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00064 - - aprc:113851425 452.981