Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00053 ATGGAGACACTGGTTGGAATTGAAGATAATGACGAGGGGAAGCTTGAAGACAGTGGTATTGATAGAAGTAGCTCTGCTCTGTCTTCACCAAAGCAGATTTCCAACCCAGTTATGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTGGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAATACGATCAGATTGAAATGGGTGTTGATGCGGACACTGGACTTCATGAAGGATGTTCACCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTAGAGTGCTTGGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAAAAGGTCAAGGAGGAAGAGAAGCTTCGTTTGGCCTGTGGATCACCTGGTCTTTCTTATGTAAATGTAGACAGCCAGTGTTCTGCTGCTGATTTGCCTATCATGGATGGAATGTTTCAGTGTGATGCTTCATTCCAGGAAATTATTCCTTCTGCAGCACCTTCTTTAAATGACAGCCATAGTAATCAATCACAAAACGTTGGTGGGTGTTCTAGACCTTCCGAAGGACAGACAGAGAGTGGATCACCTACTTCTGCTGTCTATTCTTCTTTGAAGCCTGATTTTTCAATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCTATGAGTTTAACTAACTCATTTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGACGCTGTACTCTTCAAGGATACTACAGGTGGAGAAGAGGATATCAACTATAAGGATTCATCATGTGCTGAGGATACTGGAAATGAAGATAATCAAGTTTTTTCTGGAAAGAGACTGAGAAGTCATAAAGTGGAACATGATTTGTGTAGTGAGAGTCTCCAGACAGAACAAAGAGCTGCTAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTTTCTGAAAATGAGTCCAGGGACCAGAATCCTAGGTTGTTGAGTTCACACAGAAGTATGGAACTTGGACATGTCTCGCCAAACTCATACAATGGACCTGTTAGGAATGCCTTTTCAGACGGGAGAAGTGTTGTAACTAGGTTTGACTCTCTGGGAGGTTCTGGAATTTACATTCCTTGTGTTTCCCGGATCCGAAGATGTCGGCCAAGGAAAAATATCATGCCTCTTATGAATGATATGATTTCCACCCAGAAATTCCATCAAAGTAATGGCATGGTGGAGGTTGCCAACCTAAGCAATAAGGCCCTTGGAGAGCATGGTTCTCAGGAAGACGAGGGATGGGACAAAGTCTTAAAATCAAGATCCTCACCTTCAAAGTTTCAGCGGCAATTTACTGTTGAGCAGAAAGATCGACAGGAATTGAGACTGAGAAAGGCAGAGCTATCTAGCTATAGTTTAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGCGGAATGAGAAGGAAACATCATAGAGCATGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCTTTTGCTTCCTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTCTGAACTCACGGAAGCATGGTACAGTCCCTATTCCTGAACCAATTTTGGTACGAGTAAGAGAGCTTGCTGGGATGAATTCTCAAGTACCTACAAGCTTCAGCTCAAGCAATCAACTAACAGCCTGTGCTGGGGTTGCTCATGATGATAGATCAGGGTTCTTGTAG 1962 0.4271 METLVGIEDNDEGKLEDSGIDRSSSALSSPKQISNPVMYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDADTGLHEGCSPIERSSSEKLQLECLEDTAEADPGKLNARLQYIEQMLQKVKEEEKLRLACGSPGLSYVNVDSQCSAADLPIMDGMFQCDASFQEIIPSAAPSLNDSHSNQSQNVGGCSRPSEGQTESGSPTSAVYSSLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSFDVSATTFIVKDNKLVKKCEEGSDGNVDAVLFKDTTGGEEDINYKDSSCAEDTGNEDNQVFSGKRLRSHKVEHDLCSESLQTEQRAAKRIRKPTRRYIEELSENESRDQNPRLLSSHRSMELGHVSPNSYNGPVRNAFSDGRSVVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMPLMNDMISTQKFHQSNGMVEVANLSNKALGEHGSQEDEGWDKVLKSRSSPSKFQRQFTVEQKDRQELRLRKAELSSYSLDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGLNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSNQLTACAGVAHDDRSGFL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00053 653 MobiDBLite consensus disorder prediction 175 208 - -
Pral4715g00053 653 Pfam Myb-like DNA-binding domain 539 587 IPR001005 -
Pral4715g00053 653 SMART sant 536 589 IPR001005 -
Pral4715g00053 653 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 634 - -
Pral4715g00053 653 SUPERFAMILY Homeodomain-like 534 593 IPR009057 -
Pral4715g00053 653 Gene3D - 527 636 - -
Pral4715g00053 653 CDD SANT_TRF 538 588 - -
Pral4715g00053 653 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 532 591 IPR017930 -
Pral4715g00053 653 ProSiteProfiles Myb-like domain profile. 540 587 IPR001005 -
Pral4715g00053 653 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4715g00053 Pral-Chr4715 221742 229902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00053 540 598 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 8.93e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00053 - - gmx:100782501 792.727