Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00050 ATGGAGACACTGGTTGGAATTGAAGATAATGACGAGGGGAAGCTTGAAGACAGTGGTATTGATAGAAGTAGCTCTGCTCTGTCTTCACCAAAGCAGATTTCCAACCCAGTTATGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTGGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAATACGATCAGATTGAAATGGGTGTTGATGCGGACACTGGACTTCATGAAGGATGTTCACCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTAGAGTGCTTGGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAAAAGGTCAAGGAGGAAGAGAAGCTTCGTTTGGCCTGTGGATCACCTGGTCTTTCTTATGTAAATGTAGACAGCCAGTGTTCTGCTGCTGATTTGCCTATCATGGATGGAATGTTTCAGTGTGATGCTTCATTCCAGGAAATTATTCCTTCTGCAGCACCTTCTTTAAATGACAGCCATAGTAATCAATCACAAAACGTTGGTGGGTGTTCTAGACCTTCCGAAGGACAGACAGAGAGTGGATCACCTACTTCTGCTGTCTATTCTTCTTTGAAGCCTGATTTTTCAATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCTATGAGTTTAACTAACTCATTTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGACGCTGTACTCTTCAAGGATACTACAGGTGGAGAAGAGGATATCAACTATAAGGATTCATCATGTGCTGAGGATACTGGAAATGAAGATAATCAAGTTTTTTCTGGAAAGAGACTGAGAAGTCATAAAGTGGAACATGATTTGTGTAGTGAGAGTCTCCAGACAGAACAAAGAGCTGCTAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTTTCTGAAAATGAGTCCAGGGACCAGAATCCTAGGTTGTTGAGTTCACACAGAAGTATGGAACTTGGACATGTCTCGCCAAACTCATACAATGGACCTGTTAGGAATGCCTTTTCAGACGGGAGAAGTGTTGTAACTAGGTTTGACTCTCTGGGAGGTTCTGGAATTTACATTCCTTGTGTTTCCCGGATCCGAAGATGTCGGCCAAGGAAAAATATCATGCCTCTTATGAAATTCCATCAAAGTAATGGCATGGTGGAGGTTGCCAACCTAAGCAATAAGGCCCTTGGAGAGCATGGTTCTCAGGAAGACGAGGGATGGGACAAAGTCTTAAAATCAAGATCCTCACCTTCAAAGTTTCAGCGGCAATTTACTGTTGAGCAGAAAGATCGACAGGAATTGAGACTGAGAAAGGCAGAGCTATCTAGCTATAGTTTAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGCGGAATGAGAAGGAAACATCATAGAGCATGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCTTTTGCTTCCTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTCTGAACTCACGGAAGCATGGTACAGTCCCTATTCCTGAACCAATTTTGGTACGAGTAAGAGAGCTTGCTGGGATGAATTCTCAAGTACCTACAAGCTTCAGCTCAAGCAATCAACTAACAGCCTGTGCTGGGGTTGCTCATGATGATAGATCAGGGTTCTTGTAG 1941 0.4276 METLVGIEDNDEGKLEDSGIDRSSSALSSPKQISNPVMYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDADTGLHEGCSPIERSSSEKLQLECLEDTAEADPGKLNARLQYIEQMLQKVKEEEKLRLACGSPGLSYVNVDSQCSAADLPIMDGMFQCDASFQEIIPSAAPSLNDSHSNQSQNVGGCSRPSEGQTESGSPTSAVYSSLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSFDVSATTFIVKDNKLVKKCEEGSDGNVDAVLFKDTTGGEEDINYKDSSCAEDTGNEDNQVFSGKRLRSHKVEHDLCSESLQTEQRAAKRIRKPTRRYIEELSENESRDQNPRLLSSHRSMELGHVSPNSYNGPVRNAFSDGRSVVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMPLMKFHQSNGMVEVANLSNKALGEHGSQEDEGWDKVLKSRSSPSKFQRQFTVEQKDRQELRLRKAELSSYSLDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGLNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSNQLTACAGVAHDDRSGFL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00050 646 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 525 584 IPR017930 -
Pral4715g00050 646 MobiDBLite consensus disorder prediction 175 208 - -
Pral4715g00050 646 Pfam Myb-like DNA-binding domain 532 580 IPR001005 -
Pral4715g00050 646 SMART sant 529 582 IPR001005 -
Pral4715g00050 646 Gene3D - 520 629 - -
Pral4715g00050 646 SUPERFAMILY Homeodomain-like 527 586 IPR009057 -
Pral4715g00050 646 ProSiteProfiles Myb-like domain profile. 533 580 IPR001005 -
Pral4715g00050 646 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 627 - -
Pral4715g00050 646 MobiDBLite consensus disorder prediction 1 30 - -
Pral4715g00050 646 CDD SANT_TRF 531 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4715g00050 Pral-Chr4715 221742 230205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00050 533 591 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 9.29e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00050 - - gmx:100782501 799.66