Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00049 ATGGAGACACTGGTTGGAATTGAAGATAATGACGAGGGGAAGCTTGAAGACAGTGGTATTGATAGAAGTAGCTCTGCTCTGTCTTCACCAAAGCAGATTTCCAACCCAGTTATGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGGTTGGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAATACGATCAGATTGAAATGGGTGTTGATGCGGACACTGGACTTCATGAAGGATGTTCACCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTAGAGTGCTTGGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATGCACGACTTCAGATGTTGCAAAAGGTCAAGGAGGAAGAGAAGCTTCGTTTGGCCTGTGGATCACCTGGTCTTTCTTATGTAAATGTAGACAGCCAGTGTTCTGCTGCTGATTTGCCTATCATGGATGGAATGTTTCAGTGTGATGCTTCATTCCAGGAAATTATTCCTTCTGCAGCACCTTCTTTAAATGACAGCCATAGTAATCAATCACAAAACGTTGGTGGGTGTTCTAGACCTTCCGAAGGACAGACAGAGAGTGGATCACCTACTTCTGCTGTCTATTCTTCTTTGAAGCCTGATTTTTCAATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCTATGAGTTTAACTAACTCATTTGATGTTTCAGCAACAACTTTCATAGTTAAAGATAACAAATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGACGCTGTACTCTTCAAGGATACTACAGGTGGAGAAGAGGATATCAACTATAAGGATTCATCATGTGCTGAGGATACTGGAAATGAAGATAATCAAGTTTTTTCTGGAAAGAGACTGAGAAGTCATAAAGTGGAACATGATTTGTGTAGTGAGAGTCTCCAGACAGAACAAAGAGCTGCTAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTTTCTGAAAATGAGTCCAGGGACCAGAATCCTAGGTTGTTGAGTTCACACAGAAGTATGGAACTTGGACATGTCTCGCCAAACTCATACAATGGACCTGTTAGGAATGCCTTTTCAGACGGGAGAAGTGTTGTAACTAGGTTTGACTCTCTGGGAGGTTCTGGAATTTACATTCCTTGTGTTTCCCGGATCCGAAGATGTCGGCCAAGGAAAAATATCATGCCTCTTATGAATGATATGATTTCCACCCAGAAATTCCATCAAAGTAATGGCATGGTGGAGGTTGCCAACCTAAGCAATAAGGCCCTTGGAGAGCATGGTTCTCAGGAAGACGAGGGATGGGACAAAGTCTTAAAATCAAGATCCTCACCTTCAAAGTTTCAGCGGCAATTTACTGTTGAGCAGAAAGATCGACAGGAATTGAGACTGAGAAAGGCAGAGCTATCTAGCTATAGTTTAGATGACAACATAGTGACTGTCCCCACTTCAAAAGGCGGAATGAGAAGGAAACATCATAGAGCATGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCTTTTGCTTCCTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTCTGAACTCACGGAAGCATGGTACAGTCCCTATTCCTGAACCAATTTTGGTACGAGTAAGAGAGCTTGCTGGGATGAATTCTCAAGTACCTACAAGCTTCAGCTCAAGCAATCAACTAACAGCCTGTGCTGGGGTTGCTCATGATGATAGATCAGGGTTCTTGTAG 1950 0.4277 METLVGIEDNDEGKLEDSGIDRSSSALSSPKQISNPVMYKLVRVEGDGRLVPATDDELIEVEDFLEYDQIEMGVDADTGLHEGCSPIERSSSEKLQLECLEDTAEADPGKLNARLQMLQKVKEEEKLRLACGSPGLSYVNVDSQCSAADLPIMDGMFQCDASFQEIIPSAAPSLNDSHSNQSQNVGGCSRPSEGQTESGSPTSAVYSSLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSFDVSATTFIVKDNKLVKKCEEGSDGNVDAVLFKDTTGGEEDINYKDSSCAEDTGNEDNQVFSGKRLRSHKVEHDLCSESLQTEQRAAKRIRKPTRRYIEELSENESRDQNPRLLSSHRSMELGHVSPNSYNGPVRNAFSDGRSVVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMPLMNDMISTQKFHQSNGMVEVANLSNKALGEHGSQEDEGWDKVLKSRSSPSKFQRQFTVEQKDRQELRLRKAELSSYSLDDNIVTVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGLNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSNQLTACAGVAHDDRSGFL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00049 649 MobiDBLite consensus disorder prediction 171 204 - -
Pral4715g00049 649 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 528 587 IPR017930 -
Pral4715g00049 649 ProSiteProfiles Myb-like domain profile. 536 583 IPR001005 -
Pral4715g00049 649 Pfam Myb-like DNA-binding domain 535 583 IPR001005 -
Pral4715g00049 649 SUPERFAMILY Homeodomain-like 530 589 IPR009057 -
Pral4715g00049 649 CDD SANT_TRF 534 584 - -
Pral4715g00049 649 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 630 - -
Pral4715g00049 649 Gene3D - 523 632 - -
Pral4715g00049 649 SMART sant 532 585 IPR001005 -
Pral4715g00049 649 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4715g00049 Pral-Chr4715 221742 230205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00049 536 594 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 9.02e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00049 - - gmx:100782501 798.505