Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00048 ATGGGATTGCCTGATTATGCTTCAATCCTGATCGTAGCAGCACTAATAGCTGCACTTTTATTTTTCAGCCTCGCCATGCTTGGTTGGTGTACCAGCAGAAGTATTGATCTGATACAATCCATTCCATCCACAACAACAAACTTAGCCCTTGATGACAAGCTCCAATCCTTCACCATAAGCTTAGAGTCTCGTTCTAAGACATTCCAGTACAGAACTGCAGAAACTGTACAAGGCACTGATCAGACTGAATGCATCATCTGTTTGGCACCCTTTGAAGAAGAAGACAGTGTGAGGCAGCTTCATAGCTGCAAACACATCTTTCATACGATTTGCATCGACACTTGGCTTGCCTCTCATTCTGGCTGCCCTTTGTGCAGAACCCAGATAGACCATGTGCCACCTCCAAATGCAATTGAGGAAGTGTCCCTTCCAAGAAGGTCTGTAGCTTCAGAGGACAATGACCACAATCAGATGATCTTGTTCCTTGTCAGCTCCTGA 498 0.4518 MGLPDYASILIVAALIAALLFFSLAMLGWCTSRSIDLIQSIPSTTTNLALDDKLQSFTISLESRSKTFQYRTAETVQGTDQTECIICLAPFEEEDSVRQLHSCKHIFHTICIDTWLASHSGCPLCRTQIDHVPPPNAIEEVSLPRRSVASEDNDHNQMILFLVSS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00048 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 132 IPR013083 -
Pral4715g00048 165 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 132 IPR044675 -
Pral4715g00048 165 Pfam Ring finger domain 83 126 IPR001841 -
Pral4715g00048 165 CDD RING-H2_EL5-like 83 126 - -
Pral4715g00048 165 SMART ring_2 84 125 IPR001841 -
Pral4715g00048 165 SUPERFAMILY RING/U-box 71 133 - -
Pral4715g00048 165 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4715g00048 Pral-Chr4715 219418 220100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00048 68 137 C3H Transcription Factor Family AT5G17600 45.714 3.05e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00048 - - pcin:129290944 259.61