Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4715g00027 ATGAGTTTGAGAGCGGCCGAGGAAGAATCGGGTCAGGAGATTCATATCCCGGCCGATATAGATTGGCAAATGCTTGATAAATCGAAGTTTTTCTTTCTTGGCGCTGCCCTTTTTTCAGGGGTCTCAGCGACTCTCTATCCTGTTGTGGTGTTGAAAACCAGGCAGCAGGTAGCTCAATCCCAAGTTTCATGCCTCAAAACTGCAATTTCACTGGTTAGGCTTGAGGGCTTTAGAGCATTGTACAGGGGATTTGGGACTTCCTTGATGGGCACAATCCCAGCTCGAGCACTGTACATGGCTGCCTTGGAGGTCACTAAGAGTAATGTAGGTACTGCTACCGTTAGGCTAGGACTTGCAGAACCAACTGCAGCTGCAGTTGCCAATGCAGCAGGAGGTTTGAGCGCAGCCATGGCAGCTCAACTTGTGTGGACGCCTATTGATGTTGTGAGCCAGAGATTGATGGTTCAAGGTGGGTGTAAAAACCCTAACAATCATGTGGCTAATTCAGCGCGCAATTACATCAATGGGATTGATGCCTTCAGAAAAATCCTTAACACTGATGGTCCCAGAGGATTGTACAGAGGGTTTGGGATATCCATTTTGACTTATGCTCCTTCAAATGCAGTTTGGTGGGCTTCTTACTCTGTTGCACAAAGGCTGATATGGGATGGAGTTGGGTACTATCTTTGCAAGAAAGGTGATGACAGCAACAATACTGCAGCTACCACATTGAAACCGGATTCAAAGACAGTAATGGCAGTTCAGGGAGTTAGTGCTGCAATTGCTGGTGGTATGTCTGCTTTAATTACCATGCCTTTGGATACAATCAAAACAAGACTACAGGTCTTAGATGGTGAGGAAAATGGCCGCCGAGGGCCTACAGCTATGCAAACAGTGAGGAACTTGGTTAAGGAAGGTGGTTGGACAGCTTGTTACAGAGGGTTGGGACCTCGGTGGGTTTCCATGTCAATGTCTGCAACGACAATGATCACGACCTACGAGTTTCTGAAACGGCTTTCCACGAAAAACTAG 1032 0.4709 MSLRAAEEESGQEIHIPADIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCLKTAISLVRLEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRLGLAEPTAAAVANAAGGLSAAMAAQLVWTPIDVVSQRLMVQGGCKNPNNHVANSARNYINGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWDGVGYYLCKKGDDSNNTAATTLKPDSKTVMAVQGVSAAIAGGMSALITMPLDTIKTRLQVLDGEENGRRGPTAMQTVRNLVKEGGWTACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4715g00027 343 Gene3D Mitochondrial carrier domain 29 343 IPR023395 -
Pral4715g00027 343 Pfam Mitochondrial carrier protein 253 342 IPR018108 -
Pral4715g00027 343 Pfam Mitochondrial carrier protein 125 222 IPR018108 -
Pral4715g00027 343 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Pral4715g00027 343 SUPERFAMILY Mitochondrial carrier 23 336 IPR023395 -
Pral4715g00027 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Pral4715g00027 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Pral4715g00027 343 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Pral4715g00027 343 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Pral4715g00027 343 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Pral4715g00027 343 PRINTS Mitochondrial carrier protein signature 259 281 IPR002067 GO:0055085
Pral4715g00027 343 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 343 - -
Pral4715g00027 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 339 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4715g00027 Pral-Chr4715 154538 156305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4715g00027 1 343 Chloroplast and Mitochondria Gene Families AT1G72820 77.522 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4715g00027 K15121 - qsa:O6P43_027580 552.362