Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4714g00004 ATGGGCCCATCCACGAAAAGCACGACGAAGAAGAGAAACGGGGTCGTATCAGACAAGTCGGACCCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCGCCCAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCCCTGTTTCGAGGATTCTTGGCAAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTGAGGATTCAAGCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTTGTCAGAGTTCAGGCTCGTGTGAAAGCAAGGAGTGTGAGTTTGTCTCCAGACAGGAAACACACTCAAGCAAATTCTCTTGAGCAGGCTGAGAAAGGATGGTGCGACACTCCAGGAAGTGTGGATGAAGTCAAAGCAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTTTCTACACAGCAATCAAGAGCGAGTGCCAGTCCAAACTCGAGAATCTCAAGGCCAATGTCTCCGCTGAAGCATGATAATCTAGACACTAGGAGCTTGTTAGAGCGGTGGATGGCAGCCAAGCCATGGGAAAACAGGTTGAAGTCAGAGAGATACTTTGATTCGCCGGATAGGACTCCATTATCAAGGAAAAATGATAACTTTGTTCTCCCCAGAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACCAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATGTATGATGATAGCCCTCTTTCAGCTTCGTGCACATCCCCTGAGGAAAAGAGTGTTCCTAAACCGAGCTTCATGAATTTCACGGAGTCAACCAAGGCTAAACAGAGAGCTTGCAAGTGTTCCTCCCTGAATGGAGATGCTAGAAGCACTTCTGGTTCTGAACCTTCCATTAATTTTTGGAGAGACTGTTATGCGACACCTCAGAGGGCAAGTTATCAGAGGAGATACTCCAGGAGATGA 1053 0.4805 MGPSTKSTTKKRNGVVSDKSDPLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQANSLEQAEKGWCDTPGSVDEVKAKLQMRQEAAIKRERAMAYSLSTQQSRASASPNSRISRPMSPLKHDNLDTRSLLERWMAAKPWENRLKSERYFDSPDRTPLSRKNDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPLSASCTSPEEKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTSGSEPSINFWRDCYATPQRASYQRRYSRR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4714g00004 350 Pfam IQ calmodulin-binding motif 72 89 IPR000048 GO:0005515
Pral4714g00004 350 Pfam IQ calmodulin-binding motif 50 69 IPR000048 GO:0005515
Pral4714g00004 350 Gene3D - 46 101 - -
Pral4714g00004 350 ProSiteProfiles IQ motif profile. 48 76 IPR000048 GO:0005515
Pral4714g00004 350 MobiDBLite consensus disorder prediction 1 20 - -
Pral4714g00004 350 PANTHER IQ-DOMAIN 5-RELATED 26 326 - -
Pral4714g00004 350 SMART iq_5 70 91 IPR000048 GO:0005515
Pral4714g00004 350 SMART iq_5 47 69 IPR000048 GO:0005515
Pral4714g00004 350 MobiDBLite consensus disorder prediction 166 188 - -
Pral4714g00004 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 90 IPR027417 -
Pral4714g00004 350 ProSiteProfiles IQ motif profile. 72 99 IPR000048 GO:0005515
Pral4714g00004 350 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4714g00004 Pral-Chr4714 24281 27054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4714g00004 14 339 IQD Protein Family AT1G72670 47.790 2.43e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4714g00004 - - ahf:112710157 337.421