Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4714g00003 ATGGGCCCATCCACGAAAAGCACGACGAAGAAGAGAAACGGGGTCGTATCAGACAAGTCGGACCCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCGCCCAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCCCTGTTTCGAGGATTCTTGGCAAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTGAGGATTCAAGCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTTGTCAGAGTTCAGGCTCGTGTGAAAGCAAGGAGTGTGAGTTTGTCTCCAGACAGGAAACACACTCAAGCAAATTCTCTTGAGCAGGCTGAGAAAGGATGGTGCGACACTCCAGGAAGTGTGGATGAAGTCAAAGCAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTTTCTACACAGTCAAGAGCGAGTGCCAGTCCAAACTCGAGAATCTCAAGGCCAATGTCTCCGCTGAAGCATGATAATCTAGACACTAGGAGCTTGTTAGAGCGGTGGATGGCAGCCAAGCCATGGGAAAACAGGTTGAAGTCAGAGAGATACTTTGATTCGCCGGATAGGACTCCATTATCAAGGAAAAATGATAACTTTGTTCTCCCCAGAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACCAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATGTATGATGATAGCCCTCTTTCAGCTTCGTGCACATCCCCTGAGGAAAAGAGTGTTCCTAAACCGAGCTTCATGAATTTCACGGAGTCAACCAAGGCTAAACAGAGAGCTTGCAAGTGTTCCTCCCTGAATGGAGATGCTAGAAGCACTTCTGGTTCTGAACCTTCCATTAATTTTTGGAGAGACTGTTATGCGACACCTCAGAGGGCAAGTTATCAGAGGAGATACTCCAGGAGATGA 1050 0.481 MGPSTKSTTKKRNGVVSDKSDPLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQANSLEQAEKGWCDTPGSVDEVKAKLQMRQEAAIKRERAMAYSLSTQSRASASPNSRISRPMSPLKHDNLDTRSLLERWMAAKPWENRLKSERYFDSPDRTPLSRKNDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPLSASCTSPEEKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTSGSEPSINFWRDCYATPQRASYQRRYSRR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4714g00003 349 Gene3D - 46 101 - -
Pral4714g00003 349 ProSiteProfiles IQ motif profile. 48 76 IPR000048 GO:0005515
Pral4714g00003 349 MobiDBLite consensus disorder prediction 165 187 - -
Pral4714g00003 349 MobiDBLite consensus disorder prediction 1 20 - -
Pral4714g00003 349 Pfam IQ calmodulin-binding motif 72 89 IPR000048 GO:0005515
Pral4714g00003 349 Pfam IQ calmodulin-binding motif 50 69 IPR000048 GO:0005515
Pral4714g00003 349 MobiDBLite consensus disorder prediction 165 183 - -
Pral4714g00003 349 SMART iq_5 70 91 IPR000048 GO:0005515
Pral4714g00003 349 SMART iq_5 47 69 IPR000048 GO:0005515
Pral4714g00003 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 90 IPR027417 -
Pral4714g00003 349 PANTHER IQ-DOMAIN 5-RELATED 26 325 - -
Pral4714g00003 349 ProSiteProfiles IQ motif profile. 72 99 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4714g00003 Pral-Chr4714 24281 27054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4714g00003 14 338 IQD Protein Family AT1G72670 47.645 2.61e-82 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4714g00003 - - ahf:112710157 332.413