Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4713g00012 ATGGGGCATCATTCTTGCTGCAACAAGCAGAAAGTGAAAGAGGGTTATGGTCACCTGAAGAAGATGAAAAGCTTATCAACTACATCACACTTACGGCCATGGTTGCTGGAGCTCTGTCCTAAGCTTGCTGGTCTTCAGAGGTGTGGGAAAAGTTGCAGACTTAGATGGATCAATTACCTAAGACCTGATTTGAAACGAGGAAGCTTCTCTTCTCAAGAAGCAGCCCTCATTATAGAGCTTCATAGCATTCTAGGCAACAGGTGGGCTCAGATTGCCAAGCACCTACCTGGAAGAACTGACAATGAGGTCAAGAACTTCTGGAACTCAAGCATAAAGAAGAAGCTGCTTTCTCATGATATGCTCCCCCTTCTTTTTCCACATTTTCTGATCATTTTCTTCTTCATCATCATCACCATCATCATCATAATGCTCTCCTCTGAAACCTTCTTCCCTTCTTCAAACCCTAATGATCATCTCCTCCTTAACCAGTCTCATCCTCAGCCTGATCATCATCCTCATCATCAGCTATACCATCCCATTACTACTACTCCATCACCAATCCCACAAGCTCTCATTGGTCTCCATCATAAAACTGATGATGTTAAAGCAGACATTGCAATTATGATAATCCCAATGACAATTTCCTTCATGTCCAGCAGAATCCTATATCAGAAACCCACACCACCTAATATTATTATTCCATACTGTGAAGATGGCAATAATAATAATGATAATCATGATACGTGGTCAATGTTGAATGGTCTGAGTCAAGAGAATAATCAAATTACCAAAAGTGATGATCCTCTACTTCATCATCTTGTTGCAGAGAAATTCATGAACCCAGGTTCGATGTTAATGCAGCAATATTGTGATCCGGATGATGAAACTTGGGGGAGTCCATTGTGCCCAAAATCTGACCCTTCTCTTGCCGGAATCCAGTGTTACCCACCATCATCTCTTTTTTCCCCACAACAAGATCACCATACTTTCTCAGCCAATCAAATGGAGTACATTGATGCAATCCTATCATCGTTGCCGCCCTCCGCCACAAACCCTATTCTTCCATCCAGCTTGGAGCCTTGA 1083 0.4229 MGHHSCCNKQKVKEGYGHLKKMKSLSTTSHLRPWLLELCPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSSQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDMLPLLFPHFLIIFFFIIITIIIIMLSSETFFPSSNPNDHLLLNQSHPQPDHHPHHQLYHPITTTPSPIPQALIGLHHKTDDVKADIAIMIIPMTISFMSSRILYQKPTPPNIIIPYCEDGNNNNDNHDTWSMLNGLSQENNQITKSDDPLLHHLVAEKFMNPGSMLMQQYCDPDDETWGSPLCPKSDPSLAGIQCYPPSSLFSPQQDHHTFSANQMEYIDAILSSLPPSATNPILPSSLEP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4713g00012 360 CDD SANT 68 108 IPR001005 -
Pral4713g00012 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pral4713g00012 360 FunFam Myb transcription factor 68 115 - -
Pral4713g00012 360 Pfam Myb-like DNA-binding domain 66 108 IPR001005 -
Pral4713g00012 360 PANTHER MYB DOMAIN PROTEIN 55 1 196 - -
Pral4713g00012 360 Gene3D - 68 115 - -
Pral4713g00012 360 SMART sant 65 113 IPR001005 -
Pral4713g00012 360 SUPERFAMILY Homeodomain-like 46 115 IPR009057 -
Pral4713g00012 360 Gene3D - 20 65 - -
Pral4713g00012 360 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4713g00012 Pral-Chr4713 90124 91786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4713g00012 1 117 MYB Transcription Factor Family AT3G13890 76.271 2.17e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4713g00012 Myb_DNA-binding 9.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4713g00012 K09422 - gmx:100785147 272.707