Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4713g00005 ATGGCGTGTTCTTCTCGGTCCTCTGGTATAAAGTATGATGTCTTTATCAGCTTCAGAGGCACAGACATACGCCATGGTTTTCTTAGTCATTTGAGGAAGGAATTGCAGCAGAAACAAATCGATGCCTATGTGGACAACAGACTTGAAAGTGGAGATCAAATATCACTGGCACTTGTAAGAGCCATCAAAGAATCACTCATGTCATTGATCATATTTTCAGAGGATTATGCTTCTTCAAGGTGGTGCTTAGACGAGCTGGGGCAGATTATTGAGTGTATGGAGAAGCAGAAACAGATTGTAATTCCTGTTTTCTATAATACGGATCCCTCAGATGTGAGGCATCAAAAGGGGTCTTATGGAGATGCTTTTGTCAAACATGACAAACATAATAAGGAAAAGGTGCCAATTTGGAAATCAGCTTTGAATAAAGCGGCTAATTTATCTGGGTTTCATTCATCAAATTATGAGGATGAGGCTGAGCTTATAGAAGTGATTGCCAAGCGTTTGTCAGAAAAGTTGAATATTATGTTCCAAAGTGACTTAACGGGCCTTGTTGGAATTGATGAAAGGATTGCAGATTTAGAATCGCTAATGAACCAAGGGTCAGAAAAAGTCCGAGTCATTGGAATTTGGGGCATGGGCGGTATCGGTAAGACAACTATCGCAGATGCAGTATTTAATCGATTCTATTCTGAATATGAAGGATATTGTTTTTTGGCAAATGTGAGAGAAGAATCAGAGAATCATGGGATTATGTATTTGAAAAATAAAATTCTTTCTATACTACTCAAGGAAAATGATTTGCGTATCGGTACGCCCAATGGAATACCTCCTTATGTTAGGAGAAGGCTTCTTCGAAAAAGAGTTCTGGTTGTTCTTGATGATATAAGTGATTCTGATCAACTGGAAAATTTAGTGGGAGCTCTTGACTGCTTTGGATCTGGTAGTAGAATCATTATAACAACAAGGGATAAGCAAGTGCTGGCTAAAAGAGTTGATAAAATATACGAGGTTAAGCCATTGATGTTTGATGATGCTGTTCAACTCTTTATGTCGAATGCCTTTGAGAATGATTATCTAGACAAGGAGTGGATTGAACTATCAAGGAAGGTGATTAGTTATGCAAAAGGCATTCCGTTAGTTCTGAAAGTTTTGGGTTCTTTTCTTTATGGCAAAAGCAAGGAAGAGTGGGAGAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCTAAAATTCAGGATGTGATGAGATTAAGTTATGATAAACTAGATAGAGAAGAGAAGAATATTTTCTTGTACGTCGCATGTTTCCTTAAAGGATACAAATCACAACAAATAATAGTTTTACTAAATGCTTGTGGTTTTTCATCAATTATTGGGCTCAAAGTGCTTCTAGACAAAGCTCTTATCACTGAAATCAAAGGATCAAATTCAGGAGGTTCAAGAATATTTATGCATGATTTGATACAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTTATGATCCTGGAAAACGCAGTCGATTGTGGGATGCTAATGATATATATCGAGTATTGGAGCATAACCTGGGGACTAAAGCCATTCAAAGCATAACTTTGAATGTGGCAAAAATTGAAGAGCTCTGCTTAACTCCTCAAGTCTTTGCTGAGATGTCAGAGCTAAAATTGCTTAGTTTTTCCCAGAATGATGTTGATGAAGAAATCCTACGCCTTCCTCATGGCCTTGAATCTTTGCCAAATGAACTGAGATTTCTTCACTGGGATTGCTGTCCTTTGAAATCTTTACCCTCCACATTCCGTCCAGAAAGTCTTGTTGAACTTAACATGACTAGGAGTCGTGTGGAGAAACTTTGGGATGGAGCCCTGCGTCTTGTGAATTTAAAGAAAATTGACCTCAGTAATTCCAAGCGCCTATTGGAACTCCCAGATTTTTCCATGGCCAAAAATCTTGAAGAAGTTGAACTCTACAACTGTAAAAGCTTGCGTAAGGTTCATCCTTCCATTTTAACCATCCACAAACTTGTGAAATTGAACCTTATATATTGCACATCACTTACCAGCCTTAGAAGTGAAGTCCATTTAAGATCCCTGAGTAGTCTTTCTCTTGGTGATTGCTCAAGGCTCAAAGAATTCTCTTTGACATCAGAGAATATGAGGGACTTGAGTTTGGCGGGCACAGCTATCAATGAATTGCCTTCATCCATGAGGCTTCTAAACAAACTTGAAACATTTGACTTGCATCGTTGTAAAAACCTTAAGAATCTTCCAAGCAAGTCAACTAACCTGCATTCTCTTCGAGAACTCAGGATCTTTGGTTGCATGCAGCTTGATGCATCGAATTTACACTTGTTACTTGATGGCTCAAGGTTCTTGGAAACACTGTTACTGCAAGATTGTCATAATTTATTTGAACTTCCAGACACCATCAGATTCCTATCCTCATTGAAGCATTTATCCCTAAATGAAACAGATATTGAGAGGTTGCCTACAAGCATCAAGCATCTTCCTCAACTTGAAAAACTTGACTTGAGTAATTGTAGGAGGCTTGAGTCTTTGCCTAATCTTCCACTAAGCATTAAAGAACTATATGTTACTAACTGCACTTCCCTGGAGAGAGTCATGTTTTCTTCAATGGCTGCCGATCATCTGACAGGAAAAATTCGAGTCTGCACTAGATTCCAGAATTGTGTGAACTTGGATGCACAGTCACTCGCAGCTATAGGAGTGAATTCTCATGTCAACATTAAGAGACTGGCAAATGAACATTTATCAACTATAGGAAAAAGTAAGATCCTAGATGGCCCAGTTGATGTTATTTATCCAGGAAGCAATGTTCCAGGGTGGTTCATCAACAGGACAAGGCAGTCATCGGTAACTATTGACTTATCTTCTGCTCCACCTTCCGTCTTTATGGGTTTCATTTTTTGTGCGGTTGTCTGTAAGTTCGCATCAAATGACAGCAACCTCGTCGGATGTGACTGCTACATGGAGATTAATGGTACAAGGAACAAGAATATGGGTGCATGGACTAGCATATCTGCTTGTGAATTTATGTCTGATCATGTATGTCTGTGGTACGATGAACGATGCTGTCTGAAAGCTGATGAAAACATGGAAGCAGATGAAACCAATAACCAGAAAATATCATTTGAGTTCTTTGCACAAACTGGGAGTATTTGGGAGAAGAAAAAAGATATTGTGATAAAAGAATGTGGAGTCTGCCCCGTATATGCCTCAGAACATCACAAATTCATTGAGCAAATGGAGTTGGAGTTGAAGTCACAGCTTAAAGCAATTGGTGAGAACAAACATGAGAAGACAATCCCTTCAGCTCAAAAGTCCAATGAACATATCTTTTCACCACTTCCCAGTGGATCTTGGAAGAAAGCAACACAAGGCTTAAGAGATCTCCTCAACTTGTGA 3429 0.3902 MACSSRSSGIKYDVFISFRGTDIRHGFLSHLRKELQQKQIDAYVDNRLESGDQISLALVRAIKESLMSLIIFSEDYASSRWCLDELGQIIECMEKQKQIVIPVFYNTDPSDVRHQKGSYGDAFVKHDKHNKEKVPIWKSALNKAANLSGFHSSNYEDEAELIEVIAKRLSEKLNIMFQSDLTGLVGIDERIADLESLMNQGSEKVRVIGIWGMGGIGKTTIADAVFNRFYSEYEGYCFLANVREESENHGIMYLKNKILSILLKENDLRIGTPNGIPPYVRRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDKQVLAKRVDKIYEVKPLMFDDAVQLFMSNAFENDYLDKEWIELSRKVISYAKGIPLVLKVLGSFLYGKSKEEWESQLEKLNKMPHAKIQDVMRLSYDKLDREEKNIFLYVACFLKGYKSQQIIVLLNACGFSSIIGLKVLLDKALITEIKGSNSGGSRIFMHDLIQEMGWEIVREESIYDPGKRSRLWDANDIYRVLEHNLGTKAIQSITLNVAKIEELCLTPQVFAEMSELKLLSFSQNDVDEEILRLPHGLESLPNELRFLHWDCCPLKSLPSTFRPESLVELNMTRSRVEKLWDGALRLVNLKKIDLSNSKRLLELPDFSMAKNLEEVELYNCKSLRKVHPSILTIHKLVKLNLIYCTSLTSLRSEVHLRSLSSLSLGDCSRLKEFSLTSENMRDLSLAGTAINELPSSMRLLNKLETFDLHRCKNLKNLPSKSTNLHSLRELRIFGCMQLDASNLHLLLDGSRFLETLLLQDCHNLFELPDTIRFLSSLKHLSLNETDIERLPTSIKHLPQLEKLDLSNCRRLESLPNLPLSIKELYVTNCTSLERVMFSSMAADHLTGKIRVCTRFQNCVNLDAQSLAAIGVNSHVNIKRLANEHLSTIGKSKILDGPVDVIYPGSNVPGWFINRTRQSSVTIDLSSAPPSVFMGFIFCAVVCKFASNDSNLVGCDCYMEINGTRNKNMGAWTSISACEFMSDHVCLWYDERCCLKADENMEADETNNQKISFEFFAQTGSIWEKKKDIVIKECGVCPVYASEHHKFIEQMELELKSQLKAIGENKHEKTIPSAQKSNEHIFSPLPSGSWKKATQGLRDLLNL 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4713g00005 1142 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Pral4713g00005 1142 Pfam C-JID domain 942 1082 IPR045344 -
Pral4713g00005 1142 Gene3D - 175 336 IPR027417 -
Pral4713g00005 1142 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Pral4713g00005 1142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 766 IPR044974 GO:0006952
Pral4713g00005 1142 SUPERFAMILY L domain-like 485 897 - -
Pral4713g00005 1142 Gene3D - 341 424 IPR042197 -
Pral4713g00005 1142 Gene3D - 6 174 IPR035897 -
Pral4713g00005 1142 Gene3D Ribonuclease Inhibitor 718 901 IPR032675 -
Pral4713g00005 1142 Gene3D Ribonuclease Inhibitor 512 717 IPR032675 -
Pral4713g00005 1142 SMART till_3 11 147 IPR000157 GO:0007165
Pral4713g00005 1142 PRINTS Disease resistance protein signature 835 851 - -
Pral4713g00005 1142 PRINTS Disease resistance protein signature 207 222 - -
Pral4713g00005 1142 PRINTS Disease resistance protein signature 283 297 - -
Pral4713g00005 1142 PRINTS Disease resistance protein signature 375 389 - -
Pral4713g00005 1142 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 150 IPR035897 -
Pral4713g00005 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 433 IPR027417 -
Pral4713g00005 1142 Pfam NB-ARC domain 195 422 IPR002182 GO:0043531
Pral4713g00005 1142 Pfam TIR domain 11 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4713g00005 Pral-Chr4713 55204 59489 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4713g00005 7 850 WRKY Transcription Factor Family AT4G12020 34.035 7.51e-123 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4713g00005 - - ccaj:109805840 1488.01