Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4713g00003 ATGGCTTCATCTTCCTCCCCTGCTCCATCTTCTCAATATCCACAGCCATATGATATTTTTTTAAGTTTTAGAGGTGAGGACGTCCGCGGAGGTTTCGTCAGCCATCTTTATGCTGCTCTTGGCATAAGCGAAAAAACAGAAACATTCATCGACCGCAAACTTCCGAAAGGAACGGAGTTGTGGCCATCTCTTAAGAAAGCCATTAAAGATTCAACTATGTCTCTTGTGATCTTCTCAGAAAACTATGCATCTTCTAAGTGGTGCTTGAAGGAGCTTACAAAAATATTAGATTGCTCCAAAAATCAAGGTCATCTCGTGGTGCCAGTGTTCTATAGAGTAGACCCTTCACATGTGAGGAAGCAATCTGGGAGTTACCAGAAAGCATTTGAAGACCTTAAGCGCAATGGCATCAGCGAGCAACGACTGCAGAAGTGGAAGAAGTCTCTCACTGATGCTGCCAATTTGGACGGTTTCCACATCTCCAATAGAGATGATGAAGCAGACCGAATTAAAGAAATAGTGAGGATTGTTACAGAAATGTTGAGCGAGCTGCATCCAAGTGAAGATAACCCAGAAGGCTTGATTGGAATTGAAGAGAGAATGAAGGACGTGGAATTATTGTTGGACAAGGAGTCCAACGATGTCCGAATTATTTGCATTTGGGGGATGGGCGGTCTGGGCAAAACAACTCTTGCAAGAGCATTGTATAACAAGTGGTGTTCTGAATACAAAGGGTCTCATCATTTTGTGGAAAAAGTGGGAGAAAAATCAAAGAATCATGGAATACAGGCTGTGAAGAGTGATCTTATTAAGGCATTATTAGGGGACAACAATTCTCACACTAGTTCTTATGACATGAGGAGACTTAGACGGAAAGAAGTTTTTATTGTTTTTGATGATGTTAATGATTATGATCAAGTATACAATTTGGTTGGAAGGCGCGATTGGTTTAGACCAGGGAGTAAAATCTTAATAACAACTAGAGATAGTGGAGTCCTTGGTACTAAAGTAGATCGCGATGCTATATATGAACTGAAGGGTTTGGATTCTAAGGAGGCTTTTCAACTTTTCTCCTCACATGCCTTTGGAAAAGACCGCCCTGCCCCTGACCCAAAACTAGGGGGGTTGGCCACGAAACTGACTAGGTATGCAAATGGGAATCCACTGGCCCTGAGAGTTTTAGGTTCCTCCTTGGCTAACGCGGAAGATCCAGAAACTTGGGAAAGCCGATTAGAAAAACTTCAAAAAGTAGCTGAGCCAGACATTAACAAAGTCCTGAAAATAAGTCTTGACGAACTTGATAATGAAGTGAGAGAGAGTTTCTTGGATATCGCATGTCTTGTAACTCATGGTGATAATGTTGGGACGGTAAAAGATTTGTTAAAAGCACGACGTGGTTATTCAGTTTGTTGTGAATTGAAAAGACTTAAAGAGAAAGCTCTTGTAGAAGTTGCATTTGGGAGCGTATTCATGCACGATCTGCTAAGAGAAATGGGTCGACAGGCTGTTCGTGATGAGTCACCAAAACATCCTAGAAAGCGCAGTCGATTATGGGATCCTAAAGAAATATCTGAAATATTGGGGGCAAAAAAGATAAGGGAAAGTGAAGCCATTGTTGAAGGTGTAAGCCTGAACCTTCGAGAAGTTGGAGAGATGCGCTTAAGTCCCGGGGCCTTTCGTTCAATGCCCAACCTAAAGGCTCTTAATATTTATTCTTGTGGCAAAATCGACGGTGGGGATGGATTAGACTTTTTGCCAGAAGGACTCACAAGCTTGCGTTGGATGGCATACCCTTTTGAGTCCTTGCCAGCAACATTCAAGGCTGTAAGTCTTGTTCAATTGGAAATGCCCTTGAGCAGTTTGACAAGACTTTGGGATGGAGTGCAGAATCTTGTGAACTTAAGCAAAATTACGCTCCGTCAATCAATGGGGTTGATTGAACTCCCAGATTTTTCCAAGGCCACACGTCTTGAACATGTTGATCTCGAGTGGTGCTCAAAATTGCGGAGTGTACATCCATCTATTTTATCTCTCCCCAACCTGCGTCGTTTATCGCTACGCTGTTGCCTGGCCCTTACCAGCCTTACAAGCGATACCCATCTCCAATCTCTCATTGAGCTCGATGTACATGGGTGCTCAAGGCTGAAGGAATTTTCAGTGACCTCAGAAAAAGAAGAGCTCGATTTACAACTTTCAGGAACTGCCATCAGTGGTGCGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTCGTTCATTAGCTCTAGCCGAGTGCAGAATTGTGACAAGCGTTCACGAATTGATTGAGCTGCGTGACCTTCAAGTTCTTGATGCTGGAGGGTGTAATAAGCTAGCATCACCTCTCCTGTCCAAGTGTGATAAGATGGGTGCTTTGCGAATTCTATCGCTTGCGTATTGCAATGAATTATCTGAACTTCCCAATAACATCAGCTTGCTGTCATCATTACGTCAGTTGCATCTCTCAGAGACTCATGTAGAGACCTTGCCTTCAAGCATCAAACATCTTTCACGCCTTCAACGTCTTGAACTGAATAGATGTAAAAGGCTTCGTCGTCTACCAGAGCTCCCTCCCTCTATCTTGACATTGACTGCCACCGACTGCACATCCCTTGAGACCATAGAATCCCTTGAGACCATACAATATTCACCTTCGACAAACGAAGGTGAAAAAGGAAAATATAAGCCATATCCGGGCTTTTTATTCACAAATTGCAAGAAGCTGAGTCGACGGACAATCAAAGCTGCTGAGGCAAGAGTCCTACTTGAGGTAAAGAAAGCCACTTATGACCATGCTGGATTGGAATATCCAGGAGAAAGTGTTCCAAAGTGGTTCATGTATAGGGATGAAGGGTCATCGGTGTCTGTGAATCTCAGTTCGATTCCAAATTATGAGGATGGGGTATTCCTTTTTTGCGCCTTCTTTAATAAATTACCATTTTGGTTGGGAGGAAACATTGATGCCAAATGGTTTATTGATGGTGAATATGCTTGCCGGGCCGCTAAAAGGTCGTGTGGACTGGGTGGGGTGGGGTCCTCAACGCATGTTGGTCTTTGGTATGATCCTGATTCACTTGGAGAACTAAAAAGGAAAATTGAAGAAAGGAAAAGAAATGGTCAGAGCAACACGGAGCTTGAAGTAAAATTCGAAGGTTCCAGAGAAGTAGAGATCAAAAGGTGTGGGATCGATTGGCATTACAGCCACAACCTCATTCTGTTGAATCTTGAAGAATTTCAACAGCTGGATTCAACTGAGCGATTCTCTCCAATTCCTTTCTTCAATTCCTTGCTACCAAATGGGCTATAA 3324 0.4317 MASSSSPAPSSQYPQPYDIFLSFRGEDVRGGFVSHLYAALGISEKTETFIDRKLPKGTELWPSLKKAIKDSTMSLVIFSENYASSKWCLKELTKILDCSKNQGHLVVPVFYRVDPSHVRKQSGSYQKAFEDLKRNGISEQRLQKWKKSLTDAANLDGFHISNRDDEADRIKEIVRIVTEMLSELHPSEDNPEGLIGIEERMKDVELLLDKESNDVRIICIWGMGGLGKTTLARALYNKWCSEYKGSHHFVEKVGEKSKNHGIQAVKSDLIKALLGDNNSHTSSYDMRRLRRKEVFIVFDDVNDYDQVYNLVGRRDWFRPGSKILITTRDSGVLGTKVDRDAIYELKGLDSKEAFQLFSSHAFGKDRPAPDPKLGGLATKLTRYANGNPLALRVLGSSLANAEDPETWESRLEKLQKVAEPDINKVLKISLDELDNEVRESFLDIACLVTHGDNVGTVKDLLKARRGYSVCCELKRLKEKALVEVAFGSVFMHDLLREMGRQAVRDESPKHPRKRSRLWDPKEISEILGAKKIRESEAIVEGVSLNLREVGEMRLSPGAFRSMPNLKALNIYSCGKIDGGDGLDFLPEGLTSLRWMAYPFESLPATFKAVSLVQLEMPLSSLTRLWDGVQNLVNLSKITLRQSMGLIELPDFSKATRLEHVDLEWCSKLRSVHPSILSLPNLRRLSLRCCLALTSLTSDTHLQSLIELDVHGCSRLKEFSVTSEKEELDLQLSGTAISGALRSSSGHRSKIRSLALAECRIVTSVHELIELRDLQVLDAGGCNKLASPLLSKCDKMGALRILSLAYCNELSELPNNISLLSSLRQLHLSETHVETLPSSIKHLSRLQRLELNRCKRLRRLPELPPSILTLTATDCTSLETIESLETIQYSPSTNEGEKGKYKPYPGFLFTNCKKLSRRTIKAAEARVLLEVKKATYDHAGLEYPGESVPKWFMYRDEGSSVSVNLSSIPNYEDGVFLFCAFFNKLPFWLGGNIDAKWFIDGEYACRAAKRSCGLGGVGSSTHVGLWYDPDSLGELKRKIEERKRNGQSNTELEVKFEGSREVEIKRCGIDWHYSHNLILLNLEEFQQLDSTERFSPIPFFNSLLPNGL 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4713g00003 1107 Pfam TIR domain 17 196 IPR000157 GO:0007165
Pral4713g00003 1107 SUPERFAMILY L domain-like 491 861 - -
Pral4713g00003 1107 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral4713g00003 1107 Pfam NB-ARC domain 203 433 IPR002182 GO:0043531
Pral4713g00003 1107 Pfam C-JID domain 942 1075 IPR045344 -
Pral4713g00003 1107 Gene3D - 182 340 IPR027417 -
Pral4713g00003 1107 SMART till_3 16 155 IPR000157 GO:0007165
Pral4713g00003 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 444 IPR027417 -
Pral4713g00003 1107 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 721 IPR044974 GO:0006952
Pral4713g00003 1107 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pral4713g00003 1107 Gene3D - 12 181 IPR035897 -
Pral4713g00003 1107 Gene3D - 347 434 IPR042197 -
Pral4713g00003 1107 Gene3D Ribonuclease Inhibitor 542 724 IPR032675 -
Pral4713g00003 1107 Gene3D Ribonuclease Inhibitor 725 897 IPR032675 -
Pral4713g00003 1107 PRINTS Disease resistance protein signature 288 302 - -
Pral4713g00003 1107 PRINTS Disease resistance protein signature 840 856 - -
Pral4713g00003 1107 PRINTS Disease resistance protein signature 384 398 - -
Pral4713g00003 1107 PRINTS Disease resistance protein signature 217 232 - -
Pral4713g00003 1107 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4713g00003 Pral-Chr4713 38221 45753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4713g00003 6 848 WRKY Transcription Factor Family AT4G12020 28.408 1.82e-76 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4713g00003 - - pcin:129290874 813.142