Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4713g00002 ATGGCTTCATCTTCCTCCCCTGCTCCATCTTCTCAATATCCAAAGCCACATGATATTTTTGTAAGTTTTAGAGGTGAGGACACCCGCGGATGTTTCACTAGCCATCTTTGCGATGCTCTTCGCAGAAGTAAAATAGAAACATTCGTCGACGACGGAATTGAGAAAGGAGATGAGGTATGGCCATCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTGCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACATGGTGCTTGAAGGAGCTTACTAAAATATTGGAGTGCTCCAAAAATCAAGGTCACCTTGTTGTGCCGGTGTTCTATAAAGTAGATCCTTCGCATGTGAGGAAGCAATCTGAGAGTTATCAGAAAGCATTTGAAGAACTTGAGGGCAAAGGCATCAGCAAGCGACTACTGCATCAGTGGAGGAAGGCTCTCGCTGAAGCTGCTGGTATATCTGGTTTCCCCATCACCAATAGAGTTAACGAAGCAGACAAAATTAAAGAAATAGTGGAAAGCGTTAAAGAAAGGTTGCACAAGCGGTATCCAAGTGAATATAATAGAGAAGACTTGATTGGAATTGAAGAGAGAATGAAACATGTAGAATCATTGTTGGACAAGGGGTCGAAGGATATCCGGATTATTTGCATTTGGGGGATGGGCGGTTTGGGCAAAACAACTCTTGCAGAAGCATTGTATAAGAAGTGGCATTTTGAATACGAAGGGTCAGTCTTTGTGGAAAAAGTGGGAGAAAAATCAAAGAAAGATGGAATAGATGCTTTAAGGAAGGAGCTTATTTGGAGTTTATTAGGGGATAAAGCAATATATTCTCATACAATGACTAGGCTTAGTCGGAAAAAGGTTTTCATTGTGCTTGATGATGTTGATGATATTGAACAATTAGAAAATTTAGTTGGAAGATGTGAATTTGGATCAGGTAGCAAAGTCTTAATAACAACCAGAGATAAACAAGTGCTTCGTAAGAAAGTGGATGACATATATGTGCTTCATGGTTTGGATCCTGATGAAGCTTTTCAACTTTTCTCCTTGAATGCCTTCAAAAAAGGCTACAGTGATCCAAAGATAAGAGGGCTAGCAGAACAAGTGACTGAATATGCAGGTGGAAATCCATTGGCCCTAAAGGGAAGTATTGAAGGCATGATTATGGACCTTTCGGAAGTTGAAGAGACGGGCGTTATTATTAAAGCATTTCGTTCAATGCCCAATCTAAAGTTTCTTAGGGTTTATGGAAATTTAAATGTTCAGCTTAGGAACAAGTTAAATGCTTCTGGCATGATGTTTTTGTCAAAAAACCTCATGCTATTGGATTGGGTGGGATGCCCTTTAAAGACCTTGCCGACAACATTCAAGGGTGAAAATCTTATTGAAATAAACATGCCCTTCAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAATGTTCATCCATCTATTTTATCTCTCCATAGCCTTTCTTGTTTAGAGCTAACAGGTTGCACAACCCTTGCCAGCCTCACAAGCAACACCCATCTCAAATCACTGTGTATGCTCAACTTGACAGGATGCTCAGGACTAAGTGAATTTTCGGTGACCTCAGAAAAACATTTGTTTGTCTTGGTGCTTCGTGACGCAACCATCAATGGTGAGTTGTGCTCATCAAGCGGACATGTCAGCAAAATTGATGTTTTGGACCTAGGAAGATGCGAAGGTGTGACAAGTCTTCACAAATTGGTTGACATGCGCACGCTTCGACGCCTTCATGCTGATTATTGTAATAAGTTAGCATCAAATCTGTGTTCCAAATTTGATGAGATGCGTGCTTTGCAATTTCTACGGCTTACTAATTGTAGTGAATTATATGAAGTTCCTGACAACATCAGCTTGTTGGCGTCATTAAGTCTGTTAGATCTCTCAGGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTAGAAAGTCTCACCTTAAATGGATGCAAAAGGCTTCTGTCTCTACCACAACTCCCTCCCTCTATCTCACTACTGTACGTCAATGACTGCCTGTCCCTTGAGACTTTACATTTACCTTTAATGAGTGAAGATAGAGAAGGAGATCAATTTTCTCATGAAAGATTCAGTTTCAGAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCAGAGTGCTACTTGCCATAAATAACAACAAAGCCATTTATTTCTGGGCTAACATGGAATATCCGGGAAGAAGAGTTGCAGAGTGGGTCATGTATAGGACTACACAGTCTTTCCTGACTGTGGATCTCAGTTCGATTCCACAACCTTGGGATGGCGCTTTCATTTTTTGCGCCGTCATTTCTGGATCATCGCGGTGGACAAATATTACAGCCGAATTGTTTATTGATGGTCAACATGCTTCCACGTTTGAGCACTGCTCTGTCGGTGAGTCCCTGTTATCAGATCATGTTGTTCTTTGGTACGCTCAAAGGCAGTGTCGAGAAGTACAAAGGAAAATTGAAGAAAAGAAAATAGAAGCCCAAAGCAACACTTCTTATCATCCATTGCTTCAATTTGAATTCGCAGCCTTTTCGCTTGATGATGATGAAACAACAGTAGAGATCAAAGAGTGGGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCATTATTGCATTGCAAATCGGCCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA 2754 0.4089 MASSSSPAPSSQYPKPHDIFVSFRGEDTRGCFTSHLCDALRRSKIETFVDDGIEKGDEVWPSLEKAIEDSTLCLVIFSENYASSTWCLKELTKILECSKNQGHLVVPVFYKVDPSHVRKQSESYQKAFEELEGKGISKRLLHQWRKALAEAAGISGFPITNRVNEADKIKEIVESVKERLHKRYPSEYNREDLIGIEERMKHVESLLDKGSKDIRIICIWGMGGLGKTTLAEALYKKWHFEYEGSVFVEKVGEKSKKDGIDALRKELIWSLLGDKAIYSHTMTRLSRKKVFIVLDDVDDIEQLENLVGRCEFGSGSKVLITTRDKQVLRKKVDDIYVLHGLDPDEAFQLFSLNAFKKGYSDPKIRGLAEQVTEYAGGNPLALKGSIEGMIMDLSEVEETGVIIKAFRSMPNLKFLRVYGNLNVQLRNKLNASGMMFLSKNLMLLDWVGCPLKTLPTTFKGENLIEINMPFSKLTKLWDGEQNVHPSILSLHSLSCLELTGCTTLASLTSNTHLKSLCMLNLTGCSGLSEFSVTSEKHLFVLVLRDATINGELCSSSGHVSKIDVLDLGRCEGVTSLHKLVDMRTLRRLHADYCNKLASNLCSKFDEMRALQFLRLTNCSELYEVPDNISLLASLSLLDLSGSNIETLPLSIKHLSSLESLTLNGCKRLLSLPQLPPSISLLYVNDCLSLETLHLPLMSEDREGDQFSHERFSFRNCMKLDGQSIKAVEARVLLAINNNKAIYFWANMEYPGRRVAEWVMYRTTQSFLTVDLSSIPQPWDGAFIFCAVISGSSRWTNITAELFIDGQHASTFEHCSVGESLLSDHVVLWYAQRQCREVQRKIEEKKIEAQSNTSYHPLLQFEFAAFSLDDDETTVEIKEWGVCPTSAVEYQNYIKQIQLALLHCKSASRKRKYHSLLR 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4713g00002 917 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Pral4713g00002 917 SMART till_3 16 154 IPR000157 GO:0007165
Pral4713g00002 917 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral4713g00002 917 Pfam Leucine Rich Repeat 462 481 IPR011713 -
Pral4713g00002 917 PRINTS Disease resistance protein signature 216 231 - -
Pral4713g00002 917 PRINTS Disease resistance protein signature 375 389 - -
Pral4713g00002 917 PRINTS Disease resistance protein signature 652 668 - -
Pral4713g00002 917 PRINTS Disease resistance protein signature 284 298 - -
Pral4713g00002 917 Gene3D - 15 177 IPR035897 -
Pral4713g00002 917 Pfam TIR domain 17 196 IPR000157 GO:0007165
Pral4713g00002 917 SUPERFAMILY L domain-like 390 737 - -
Pral4713g00002 917 Gene3D - 178 335 IPR027417 -
Pral4713g00002 917 Gene3D Ribonuclease Inhibitor 390 533 IPR032675 -
Pral4713g00002 917 Gene3D Ribonuclease Inhibitor 534 726 IPR032675 -
Pral4713g00002 917 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Pral4713g00002 917 Pfam NB-ARC domain 198 383 IPR002182 GO:0043531
Pral4713g00002 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 384 IPR027417 -
Pral4713g00002 917 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 397 576 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4713g00002 Pral-Chr4713 17419 22171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4713g00002 385 667 WRKY Transcription Factor Family AT4G12020 28.479 2.17e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4713g00002 - - pcin:129290880 449.514