Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4713g00001 ATGAAGCTCTATCGCAGAAACCAAATAGATACATACATCGACTATAGACTTGAGAAGGGAGATGAGGTATGGCCGTCTCTTGAGAAAGCCATTGAAGATTCAAGTCTAGTGGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACAAGAAAGCATTTGAAGAACATGAGTGCAAAATAAACATCAACAATCAACAACTGCAAAAGTGGAGGGAGGCTCTTACTCAAGCTGCCAATTTGTCTGGTTGGCATTGTGGCTTCAATAGGAATGAAGCGGAGCTAATTGAAGAAATAGTGAATCGTGTCATACAAAAGTTGGGCCCTAGTTATCAAAGTGAAGATTATCTCGAAGGCTTGATTGGAATTCACAAAAGAATGGCAGTTGTAGAATCATTGTTGGACAAAGGTTCAAACAATAGTGGTTGCCAATTCATTGGAATTTGGGGGATGGGCGGTTTGGGCAAAACAACTCTTGCAAAAGCATTGTTTAACAAATTGCATTTTACATATGAAGGGTCTTGCTTTTTGGCTAATGTAAGGGAAGAATCAAAGAGATATGGAATAGATGCTTTGAGGGAAAAAATTGTTTGGAGGTTATTAGGGGATAAAGAATCTCACATTGGCAATACAATACATCCTTATACCATCAGTAGGCTTGGTCGGAAAAAGGTTTTCATTGTGCTTGATGATGTTGATGATGTTGAACAATTAGAAAATTTAGTTGGAAGACATGAATTTGGATCAGGAAGTAAAATCTTGATAACAACCAGAGATAGGCAAGTGCTTGCTGGTATAAAAGTGGTCGATGTATATGTGCTTGATCGTTTGAATCCTTTTGAAGCTTTTGATCTATTCTCCATCAATGCTTTTAGAAATGACTATGCTGACTTGAAGATAAGAAAGCTAGCACAACAAGTGACTCAATATGCGGATGGAAATCCATTGGCCCTAAAGGTTTTTGCCGCCTTGTTACGTGGCAAAAATCAGGAGGCATGGAAAAACCAATTGGAAAAGCTTCAAAAATTACCTCTTCCAGAAATTAATCATATTCTCAGATTGAGTTTTGAAGAACTTGATGAGGAAACGAAAAATATTTTCTTACATATCGCATGTTTTGTCAATTATTATCATTATGTCAAGGATGCAAAAAAATTCTTAGGTGCATGCGGTTATTCAATTGAGATTGGATTGAAGATTCTTGAAGATAAAGCTCTTTTAGATTTTTACGGAGGAATGATAGGTATGCACAATCTAATAGAAGAAATGGGTAAACAAATTGTTCGTGAAGAATCATTAAAATATCCTACATGGTGCAAGATATTTTGGATTTTTGGGAGAAGTTCTGAAGTATTGAAGGAAAATAGGGGAAGTATTGAAGGCTTGATTATCAACCGTTCAGAAGTTGAAGAGATGTGGGTAATTAATAAAGCCTTTCGTTCAATGCACAATCTGAAGTTTCTTAGGTTTTATGGAAATTTCAATAATCTAAATGCTTCTCGTATGGAGCGTTTGCCAAGAAAGCTCAGGCTATTGGATTGGGTGGGATGCCCTTTAGAGTCCTTGCCCACAACATTCAATGGTGAAAATCTCGTTGAAATAAAGATGAGCAACAACAATTTGACAAAACTTTGGGATGGAGAGCAGAATCTTGCGAATTTAAGCAGAATTGATCTTCATGGATCAAAAGATTTGATTAAGCTCCCAAATTTTTCCAAAGCCATACATCTTGCAGAAGTTCATCTTCAGGGTTGTTTAAAATTGCAAAATGTTCATCCATCTATTTTATCTCTCCATAGCCTTTGTCGTTTATTGCTAAATGACTGCAAAGCCCTTACCAGCCTTACGAGCAAGACCCATCTCAAATCACTGAGTGAATTGGACTTGACAGGATGCTCAGGACTACGTGAATTTTCAGTGACCTCAGAAAATAATCGGTTTCAATTGATGCTTTGCAGAACAGCCATCAATGGTGAGTTGTGCTCATCAAGCGGTTGTCTTAGCAAAATTGACTTTTTGGACCTCGAAAGTTGCGGAGGTGTGACAAGTCTTCACAAATTGTTTGCGATGCACACCCTTCGACGCCTTCATGCTGGTTATTGTAATAAGCTAGCATCAAATCTACGTTCCATATTTGATGAGGTGCCGCGTGCTTTGGGATCTCTATGGCTGGATAATTGTAGTAAATTATATGAAGTGCCTGACAACATCAGCTTCTTGTTGTCATTACATGAGTTGCGTCTCTCAAGGAGCAATATAGAGACCTTGCCTTTAAGCATCAAGCATCTTTCAAGCCTGCGGACTCTTTACTTAGATGGATGCGAAAGGCTTCGGTCTTTACCACAACTCCCTCCCTCTATCCGTACACTGAGCGCCAATGAATGCCTATCCCTTGAGACCTTACATTCACCTTTAATGAGTGAAGGTAGAGAAGGAAAACAATATTATGAATACTTCAATTTCATAAATTGTATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCGTAGTGCTACTTGACATGAATGATAACCAAGCTGACAGAGCTAGTATGGAATATCCGGGAAAAAGTGTTGCAGAATGGTTCATGTATAGGACTACACAGTCTTTGGTGACTGTGGATCTCAGTTCGATTCCACAACCTTGGGATGGCGTTTTCATTTTCTGCGCCGTCATTCCTGCAGGAACACCACGGTCGAGTTTCATTGAAGCCAAATTGTTTATTGATGGTCATCAATGTGCTTCCGTGTTTGAAGGATCGTATTTGACTGATGGGTCCATGTTGTCTGATCATGTTTTTCTTTGGTACAATAGAAAGTCATGTGAAGAAGTACTAAGGAAAATTGAAGAAAAGAAAAGAGAAGCTCAAAGCAACACTTATCATCCATTGCTTCAAATTCAATTCGCACCTCGTGATGATGAAAAACCAGTAGAGATCAAAGAGTGTGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATTACATCAGACGAATTCAATTGGCATTATTGCATCCACATCGTAGCTCTAATGCAACGCAATCGGCCTCTCGAAAGCGCAAATATCACAGCTCACTTCCATGA 3087 0.3903 MKLYRRNQIDTYIDYRLEKGDEVWPSLEKAIEDSSLVDPSHVRKQSGSYKKAFEEHECKININNQQLQKWREALTQAANLSGWHCGFNRNEAELIEEIVNRVIQKLGPSYQSEDYLEGLIGIHKRMAVVESLLDKGSNNSGCQFIGIWGMGGLGKTTLAKALFNKLHFTYEGSCFLANVREESKRYGIDALREKIVWRLLGDKESHIGNTIHPYTISRLGRKKVFIVLDDVDDVEQLENLVGRHEFGSGSKILITTRDRQVLAGIKVVDVYVLDRLNPFEAFDLFSINAFRNDYADLKIRKLAQQVTQYADGNPLALKVFAALLRGKNQEAWKNQLEKLQKLPLPEINHILRLSFEELDEETKNIFLHIACFVNYYHYVKDAKKFLGACGYSIEIGLKILEDKALLDFYGGMIGMHNLIEEMGKQIVREESLKYPTWCKIFWIFGRSSEVLKENRGSIEGLIINRSEVEEMWVINKAFRSMHNLKFLRFYGNFNNLNASRMERLPRKLRLLDWVGCPLESLPTTFNGENLVEIKMSNNNLTKLWDGEQNLANLSRIDLHGSKDLIKLPNFSKAIHLAEVHLQGCLKLQNVHPSILSLHSLCRLLLNDCKALTSLTSKTHLKSLSELDLTGCSGLREFSVTSENNRFQLMLCRTAINGELCSSSGCLSKIDFLDLESCGGVTSLHKLFAMHTLRRLHAGYCNKLASNLRSIFDEVPRALGSLWLDNCSKLYEVPDNISFLLSLHELRLSRSNIETLPLSIKHLSSLRTLYLDGCERLRSLPQLPPSIRTLSANECLSLETLHSPLMSEGREGKQYYEYFNFINCMKLDGQSIKAVEAVVLLDMNDNQADRASMEYPGKSVAEWFMYRTTQSLVTVDLSSIPQPWDGVFIFCAVIPAGTPRSSFIEAKLFIDGHQCASVFEGSYLTDGSMLSDHVFLWYNRKSCEEVLRKIEEKKREAQSNTYHPLLQIQFAPRDDEKPVEIKECGVCPTSAVEYQNYIRRIQLALLHPHRSSNATQSASRKRKYHSSLP 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4713g00001 1028 Gene3D - 35 111 IPR035897 -
Pral4713g00001 1028 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 640 IPR044974 GO:0006952
Pral4713g00001 1028 Gene3D Ribonuclease Inhibitor 456 644 IPR032675 -
Pral4713g00001 1028 Gene3D Ribonuclease Inhibitor 645 828 IPR032675 -
Pral4713g00001 1028 SUPERFAMILY L domain-like 415 842 - -
Pral4713g00001 1028 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 83 IPR035897 -
Pral4713g00001 1028 Gene3D - 276 359 IPR042197 -
Pral4713g00001 1028 Gene3D - 115 270 IPR027417 -
Pral4713g00001 1028 Coils Coil 939 959 - -
Pral4713g00001 1028 PRINTS Disease resistance protein signature 144 159 - -
Pral4713g00001 1028 PRINTS Disease resistance protein signature 618 634 - -
Pral4713g00001 1028 PRINTS Disease resistance protein signature 218 232 - -
Pral4713g00001 1028 PRINTS Disease resistance protein signature 310 324 - -
Pral4713g00001 1028 Pfam NB-ARC domain 129 352 IPR002182 GO:0043531
Pral4713g00001 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 369 IPR027417 -
Pral4713g00001 1028 Pfam TIR domain 37 120 IPR000157 GO:0007165
Pral4713g00001 1028 Pfam Leucine Rich Repeat 529 548 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4713g00001 Pral-Chr4713 2848 6942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4713g00001 120 831 WRKY Transcription Factor Family AT5G45050 28.745 5.33e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4713g00001 - - pcin:129290874 872.078