Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4711g00007 ATGGCTTCATCTTCCTCCCCTGCTCCATCTTCTCAATATCCAAAGCCACATGATATTTTTGTAAGTTTTAGAGGTGAGGACACCCGCGGATGTTTCACTAGCCATCTTTGCGATGCTCTTCGCAGAAGTAAAATAGAAACATTCGTCGACGACGGAATTGAGAAAGGAGATGAGGTATGGCCATCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTGCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACATGGTGCTTGAAGGAGCTTACTAAAATATTAGAGTGCTCCAAAAATCAAGGTCACCTTGTTGTGCCGGTGTTCTATAAAGTAGATCCTTCACATGTGAGGAAGCAATCTGAGAGTTATCAGAAAGCATTTGAAGAACTTGAGGGCAAAGGCATCACCAAGCGACTACTGCATCAGTGGAGGAAGGCTCTCGCTGAAGCTGCTGGTATATCTGGTTTCCCCATCGCCAATAGAGTTAACGAAGCAGACAAAATTAAAGAAATAGTGGAAAGCGTTAAAGAAAGGTTGCACAAGCGGTATCCAAGTGAATATAATAGAGAAGACTTGATTGGAATTGAAGAGAGAATGAAAGATGTAGAATCATTGTTGGACAAGGGGTCGAAGGATATCCGAATTATTTGCATTTGGGGGATGGGCGGTTTGGGCAAAACAACTCTTGCAGAAGCATTGTATAAGAAGTGGCATTTTGAATACGAAGGGTCAGTCTTTGTGGAAAAAGTGGGAGAAAAATCAAAGAAAGATGGAATAGATGCTTTAAGGAAGGAGCTTGTTTGCAGTTTATTAGGGGATAAAGCAATATATTCTCATACCATGACTAGGCTTCGTCGGAAAAAGGTTTTCATTGTGCTTGATGATGTTGATGATGTTGAACAATTAGAAAATTTAGTTGGAAGATTTGAATTTGGATCAGGTAGCAAAGTCTTAATAACAACCAGAGATAAGCAAGTGCTTCGTAAGAAAGTGGATGACATATATGTGCTTCATGGTTTGGATCCTCATGAAGCTTTTCAACTTTTCTCCTTGAATGCCTTCAAAAAAGGCTACAGTGATCCAAAGATGAGAGGGCTAGCAGAACAAGTGACTGAATATGCAGGTGGAAATCCATTGGCCCTAAAGGTTTTAGGCCTCTTCTTATGCGGCAAAAAGCAAGAAGCGTGGAAAAGCCAATTGGAAAAGCTTCAAAAATTACCTTGCCCAAAAGTCAATGATATCCTTAGATTGAGCTTCGAAGGACTTGATGATGAGGAAGAGAAAAATATTTTCTTGCATATCGCATGTTTTTTCAATTATTATTATGATGTTGAGAATGTAAAAAAATGGTTAGATGCATGCGGTTATTCAACCGAGATTGGATTGAGGAGACTTGAAGATAAAGCTCTTTTAGATATTGATAGAGGAAAAATATGTATGCACGGTCTGATAAAACAAATGGGTAAACAAATTGTTCGTGAAGAATCATTAAAATATTCTACATGGTGCAACATATTTTGGATTTTCAAGAAAAGTTCTGAAATATTGAAGAAAAATATGGGAAGTATTGAAGGCATGATTATGGACCTTTCGGAAGTTGAAGAGACGGGCGTGATTATTAGAGCATTTCGTTCAATGCCCAATCTAAAGTTTCTTAGGGTTTATGGAAATTTAAATGTTCAGCTTAGGAACAAGTTAAATGCTTTTGGCATAATGTTTTTTTCAAAAAACCTCATGCTATTGGATTGGGTGGGATGCCCTTTAAAGACCTTGTCGACAACATTCAAGGGTGAAAATCTTGTTGAAATAAACTTGCCTTACAGTAAATTGACAAAACTTTGGGATGGAGAGCAGAATCTTGTGAATTTAAGCAAAATCAATCTTTGTGGATCAGAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCCATACATCTTGCAGAAGTTAATCTGGCATGTTGCACAAAATTGCAAAATGTTTATCCATCAATTTTATCTCTCCATAGCCTTTGTAATTTATTGCTAAGAGATTGCAAAACTCTTACCAGCCTTGTCAGCAACACCCATCTCAAATCACTGAGTGAACTCAGCTTGACAGGATGCTCAGGACTAAGTGAATTTTCGGTGACCTCAGAAAAACTTTTGTTTATCTTGGTGCTTAGTGACGCAACCATCAATGGTGAGTTGTGCTCATCAAGCGGACATCTCAGCAAAATTGTTGTTTTGAATCTAGGAAGATGCGAAGGTGTGACAAGTCTTCACAAATTGGTTGACATGCGCACCCTTCGATACCTTGATGCTGATTATTGTAATAAGTTAGCATCAAATCTGTGTTCCAAATTTGATGAGACGCGTGCTTGGAGTTTTCTACGGCTGACTAATTGTAGTGAATTATATGAAGTGCCTGACAACATCAGCTTGTTGTCGTCATTAACCCATTTAGATCTCTCGGGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTACACAGTCTCACCTTAAATGGATGCAAAAGGCTTCTGTCTCTACCACAACTCCCTCCCTCTATCTCACAACTGTACGTCAATGACTGCCTGTCCCTTGAGACTTTACATTTACCTTTAATGAGTGAAGATAGAGAAGGACATCAATTTTCTCGCGAAAATTTCAGTCTCATAAATTGCATGAAGTTGGATGGGCAGTCAATCAAGGCTATTGAGGCCAGAGTGCTACTTGCCATAAATAACAACAAAGCCATTTATTTGTGGGCTAAAATGGAATATCCGGGAAGAAGAGTTGCAGAGTGGGTCATGTATAGGACTACACAGCCTTTCCTGACTGTGGATCTCAGTTCGATTCCACAACCTTGGGATGGCGCTTTCATTTTTTGCGCCGTCATTTCTGGATCATCACGGTGCACAAATATTACAGCCAAATTGTTTATTGATGGTCAACATGCTTCCACGTTTGCGCACTGCTCTCTCGGTGAGTCCCTGTTATCAGATCATGTTGTTCTTTGGTACGATCAAATGCCATGTCGAGAAGTACAAAGCAAAATTGAAGAAAAGAAAATAGAAGCCCAGAGCAACACTTATCATCCATTGCTTCAATTTGAATTCGCAGCCTTTTCGCTTGATGAAACAACAGTAGTGATCAAAGAGTGGGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCATTATTGCATTGCAAATCGGCCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA 3279 0.3943 MASSSSPAPSSQYPKPHDIFVSFRGEDTRGCFTSHLCDALRRSKIETFVDDGIEKGDEVWPSLEKAIEDSTLCLVIFSENYASSTWCLKELTKILECSKNQGHLVVPVFYKVDPSHVRKQSESYQKAFEELEGKGITKRLLHQWRKALAEAAGISGFPIANRVNEADKIKEIVESVKERLHKRYPSEYNREDLIGIEERMKDVESLLDKGSKDIRIICIWGMGGLGKTTLAEALYKKWHFEYEGSVFVEKVGEKSKKDGIDALRKELVCSLLGDKAIYSHTMTRLRRKKVFIVLDDVDDVEQLENLVGRFEFGSGSKVLITTRDKQVLRKKVDDIYVLHGLDPHEAFQLFSLNAFKKGYSDPKMRGLAEQVTEYAGGNPLALKVLGLFLCGKKQEAWKSQLEKLQKLPCPKVNDILRLSFEGLDDEEEKNIFLHIACFFNYYYDVENVKKWLDACGYSTEIGLRRLEDKALLDIDRGKICMHGLIKQMGKQIVREESLKYSTWCNIFWIFKKSSEILKKNMGSIEGMIMDLSEVEETGVIIRAFRSMPNLKFLRVYGNLNVQLRNKLNAFGIMFFSKNLMLLDWVGCPLKTLSTTFKGENLVEINLPYSKLTKLWDGEQNLVNLSKINLCGSEDLIELPNFSKAIHLAEVNLACCTKLQNVYPSILSLHSLCNLLLRDCKTLTSLVSNTHLKSLSELSLTGCSGLSEFSVTSEKLLFILVLSDATINGELCSSSGHLSKIVVLNLGRCEGVTSLHKLVDMRTLRYLDADYCNKLASNLCSKFDETRAWSFLRLTNCSELYEVPDNISLLSSLTHLDLSGSNIETLPLSIKHLSSLHSLTLNGCKRLLSLPQLPPSISQLYVNDCLSLETLHLPLMSEDREGHQFSRENFSLINCMKLDGQSIKAIEARVLLAINNNKAIYLWAKMEYPGRRVAEWVMYRTTQPFLTVDLSSIPQPWDGAFIFCAVISGSSRCTNITAKLFIDGQHASTFAHCSLGESLLSDHVVLWYDQMPCREVQSKIEEKKIEAQSNTYHPLLQFEFAAFSLDETTVVIKEWGVCPTSAVEYQNYIKQIQLALLHCKSASRKRKYHSLLR 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4711g00007 1092 Gene3D Ribonuclease Inhibitor 714 905 IPR032675 -
Pral4711g00007 1092 Gene3D Ribonuclease Inhibitor 527 713 IPR032675 -
Pral4711g00007 1092 PRINTS Disease resistance protein signature 689 705 - -
Pral4711g00007 1092 PRINTS Disease resistance protein signature 216 231 - -
Pral4711g00007 1092 PRINTS Disease resistance protein signature 284 298 - -
Pral4711g00007 1092 PRINTS Disease resistance protein signature 375 389 - -
Pral4711g00007 1092 Gene3D - 178 335 IPR027417 -
Pral4711g00007 1092 SUPERFAMILY L domain-like 530 918 - -
Pral4711g00007 1092 SUPERFAMILY "Winged helix" DNA-binding domain 411 497 IPR036390 -
Pral4711g00007 1092 Gene3D - 340 424 IPR042197 -
Pral4711g00007 1092 Pfam Leucine Rich Repeat 600 619 IPR011713 -
Pral4711g00007 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 711 IPR044974 GO:0006952
Pral4711g00007 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 435 IPR027417 -
Pral4711g00007 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Pral4711g00007 1092 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral4711g00007 1092 Pfam NB-ARC domain 198 407 IPR002182 GO:0043531
Pral4711g00007 1092 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Pral4711g00007 1092 Gene3D - 15 177 IPR035897 -
Pral4711g00007 1092 SMART till_3 16 154 IPR000157 GO:0007165
Pral4711g00007 1092 Pfam TIR domain 17 196 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4711g00007 Pral-Chr4711 116316 121041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4711g00007 6 877 WRKY Transcription Factor Family AT4G12020 27.951 1.94e-79 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4711g00007 - - pcin:129290874 931.398