Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4711g00006 ATGGCTTCAGGGTCATCCCCTGCTCCATCTTCTCGATCTCCAAAGAAAAATGATGTTTTTATAAGTTTTAGAGGTGAGGACATCCGCGGAACTTTCACCAGCCATCTTTGCGATGCTCTTCGCAGAAACGGAATAGAAACATTCATCGACGACCGAGTTGACGACGGAATTGAGAAAGGAGATGAGGTATGGCCCTCTCTTGAGAAAGCCATTGAAGATTCAACTATGTCCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACGTGGTGTTTGGAGGAGCTTACAAAAATATTAGAGTGCTACAAAAATCAAGGTCACCGTGTTATGCCAGTGTTCTATAGAGTAGATCCTTCACGTGTGAGGAAGCAGTCTAGGAGTTACAAGAAAGCATTTGAAGAACATGAGCACGAGAGAAACATCGATATACAACAACTGCAAAAGTGGAGGGAGGCTCTCGCTGAAGCTGCTGGTATATGTGGTTTCCCCATCACCAATAGATCTAATGAAGCAGACAAAATTAAAGAAATAGTGGAAAGTGTTAAAAAAAAGTTGGGCAAGCGGTATCCAAATGAAGATAACGGAGAAGACTTGGTTGCAATTGAAGAGAGAATGAAAGATGTAGAATCATTGTTGGACACGGAGTCCAACGATGTCCGAATCATTTGCATTTGGGGAATGGGTGGCTTGGGCAAAACAACTCTTGCAAGAGCATTATATAACAAGCGGCATTTCGATCACGAAGGGTCTTACTTTGTGGAAAAAGTGGGAGAAAAGTCAAAGAATCGTGGCATAGAGGCTGTGAAGAAAGATCTTATTTCGGCATTATTAGGGGATAAAAATCCTCACACTAGCTCTTACGACATGACAAGACTTAGACGGAAAGAGGTTTTCATTGTTTTTGATGATGTCGATAATTATGATCAAGTACACAATTTGGTTGGAAGACGCGATTGGTTTAAACCAGGGAGTAAAATCTTAATAACAACTAGAGATAAACAAGTCCTTGGTACTAAAGTAGATCGTGATGCTATATATGAACTGAAGGGTTTGGATTCTAGTGGGGCTTTTAAACTCTTCTCTTCACATGCCTTTGGAAAAGACTGCCCTATCCCTGACCCAAATCTAGAAAGGTTGGCAAAGAAAGTGACTAGGTATGCAAATGGAAATCCATTGGCCCTAAAAGTTTTAGGTTCCTCCTTGCCTTATGAGAACGATCAAGAAGTTTGGGAAAGCCTGTTAGAAAAGCTTCAAAAATTACCTGATCAACGAATTAACGAAGTCCTACAAATAAGTCTTGAAGGACTTGATGCTGGAGAGAGAGAGAGTTTCCTGGATATCGCATGTCTTTTAACTGGTGATAATGATGTTGAGGGATGTCTTTTAACTGATGGTGTTGAGGCGGTAAAAGATTTGTTAGAAGCACGACGTGGTTATTCAATCTGTTCTGAATTGAAAAGACTTAGAGAGGCAGCTCTTTTACAAGTTGATAAATTTGGGAGAATATCAATGCACGATCTGCTAAGAGAAATGGGTCGACAGGTTGTTCGTGATGGGTCATCAAGAAATCTTAGAAAGCGCAGTCGATTATGGGATCCTAAAGAAATATCTGAAATATTGGGGGCAAAAAAGAGAAGTAAAGCCATTGAAGGTGTAAGACTGAACCTTTCAAAAGTTGGAGAGATGCGCTTAAGTCCTGGAGCCTCTCTTTCAATGCCCAACGTAAAGATTCTTAATTTTTATTCTTGTTGCAAAGTCGATGATGGAGATGAAGTCAAAGTAGAAATCCCTGATGGATTAGACTTTTTGCCAGAAGGACTCATAAAATTGCGTTGGATGGCATACCCTTGTGAGTCCTTGCCAGCAACATTCAAGGCTGAAAATCTTGTTCAATTTGAAATGCCCCACAGCAGTTTGACAAGACTTTGGGATGGAGTGCAGAATCTTCCGAACTTAATCAAAATTACGCTCGCTCAATCAGAAGACTTGATTGAACTCCCAGATTTTTCCAAGGCCACACGTCTTGAACATGTTAATCTCAATCTGTGTTCAAAATTGCAAAGTGTTCATCCATCTATTTTATCTCGCCACAGCCTGCGTGGTTTATGGCTACGCCTCTGCAAGTCCCTTACCAGCCTTACAAGCGATACCCATCTCCGATCTCTCATTCGGCTCGATGCAGGTGGTTGCTCAAGTCTGGAGGAATTTTCAGTGACCTCAGAAAATGATGAGTTCTATTTAGACCTTTCAGGAACTGCCATCAGTGGTGCGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTCGTTCATTGTCTCTAAGCATTTGCAGAAATGTGACAAGTGTTCACAAATTGATTAAGCTGCGTGACCTTCGACGTCTTGAAGCTGGACGGTGTAATGGGCTAGCATCACGTCTCCTGTCCAACTGTGATAAGATGCGTGCTTTGGAAGTTCTATGGCTTCCGGATTGCAATGAATTATCTGAACTTCCTAATGAAATCAGGTCGCTGTCATCATTAGTTGAGTTAAATCTCTCAGGGAGTCATTTACAGACCTTGCCTCTAAGCATCAAACATCTTCCACGCCTGACAAGTCTTGACCTGTCTGGATGTAAAAATCTTTGTTGTCTATTAGAGCTCCCTCCCTCTATCTTGACATTGAATGCCGCTAACTGCACATCCCTTGAGACCATACAATATTCACCTTTGACAAACGAAGGTGAAGAAGGAAAAGAGAAGGCATATCCGTGCTTTATATTCACAAATTGCAAGAAGCTGAATCGACGGGCAATCAAAGCTGCTGAGGCAAGAGTGCTACTTGAGATAAATAAGGCCATTTATGACTTTGCTAGATTGGAATATCCAGGAGAAAGACTTCCAAAGTGGTTCGTGTTTAAGAGTACTAAAGAGGATCCCATGACTGTGAATCTCTCTTCGATTCCACGATCTTGGGATGGGAGATTGTTTTTTGGCGCCGTCGTTTCTGAATTACCACAGTGGACAGAAATTGAGGTCCGATGGTTTGTTGATAGTCAATATGCTTGCAGGGTTGACGATAGCTCGTTTTTGGTGACGTCGTCAGATCATGTTTTTCTTTGGTATCGTCCAGATTCATTACGACAACTAAAAAGGAAGATTGAATCAAAGGAAAGAGATGCTCAAAGCAAGACTTATCGTCCACGTGTTGAAATTAAGTTCAGACTCCGTAAGCCGGGTGGCAAAATGATAACAGAAGCAAAGATCAAAGAGTGTGGGCCTCCTTATGTTTGCAGTGGCATACATGCACTCGTTGCATTATATTTCAACCAATGCACTTCGAGCTTGTTTTCAAGCGACCATCGTCTTCCTCCTCGTCATCAGTCGGCCGTTGACTTCGCCATCAACTGCAGATCTACAATGGTTGCTCCTTTCACAAAGAAGCTGCCTCAAGTTGGATGA 3438 0.42 MASGSSPAPSSRSPKKNDVFISFRGEDIRGTFTSHLCDALRRNGIETFIDDRVDDGIEKGDEVWPSLEKAIEDSTMSLVIFSENYASSTWCLEELTKILECYKNQGHRVMPVFYRVDPSRVRKQSRSYKKAFEEHEHERNIDIQQLQKWREALAEAAGICGFPITNRSNEADKIKEIVESVKKKLGKRYPNEDNGEDLVAIEERMKDVESLLDTESNDVRIICIWGMGGLGKTTLARALYNKRHFDHEGSYFVEKVGEKSKNRGIEAVKKDLISALLGDKNPHTSSYDMTRLRRKEVFIVFDDVDNYDQVHNLVGRRDWFKPGSKILITTRDKQVLGTKVDRDAIYELKGLDSSGAFKLFSSHAFGKDCPIPDPNLERLAKKVTRYANGNPLALKVLGSSLPYENDQEVWESLLEKLQKLPDQRINEVLQISLEGLDAGERESFLDIACLLTGDNDVEGCLLTDGVEAVKDLLEARRGYSICSELKRLREAALLQVDKFGRISMHDLLREMGRQVVRDGSSRNLRKRSRLWDPKEISEILGAKKRSKAIEGVRLNLSKVGEMRLSPGASLSMPNVKILNFYSCCKVDDGDEVKVEIPDGLDFLPEGLIKLRWMAYPCESLPATFKAENLVQFEMPHSSLTRLWDGVQNLPNLIKITLAQSEDLIELPDFSKATRLEHVNLNLCSKLQSVHPSILSRHSLRGLWLRLCKSLTSLTSDTHLRSLIRLDAGGCSSLEEFSVTSENDEFYLDLSGTAISGALRSSSGHRSKIRSLSLSICRNVTSVHKLIKLRDLRRLEAGRCNGLASRLLSNCDKMRALEVLWLPDCNELSELPNEIRSLSSLVELNLSGSHLQTLPLSIKHLPRLTSLDLSGCKNLCCLLELPPSILTLNAANCTSLETIQYSPLTNEGEEGKEKAYPCFIFTNCKKLNRRAIKAAEARVLLEINKAIYDFARLEYPGERLPKWFVFKSTKEDPMTVNLSSIPRSWDGRLFFGAVVSELPQWTEIEVRWFVDSQYACRVDDSSFLVTSSDHVFLWYRPDSLRQLKRKIESKERDAQSKTYRPRVEIKFRLRKPGGKMITEAKIKECGPPYVCSGIHALVALYFNQCTSSLFSSDHRLPPRHQSAVDFAINCRSTMVAPFTKKLPQVG 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4711g00006 1145 Gene3D - 14 182 IPR035897 -
Pral4711g00006 1145 Gene3D - 183 343 IPR027417 -
Pral4711g00006 1145 SMART till_3 16 159 IPR000157 GO:0007165
Pral4711g00006 1145 Coils Coil 198 218 - -
Pral4711g00006 1145 Coils Coil 1039 1059 - -
Pral4711g00006 1145 ProSiteProfiles TIR domain profile. 15 185 IPR000157 GO:0007165
Pral4711g00006 1145 Gene3D - 351 437 IPR042197 -
Pral4711g00006 1145 PRINTS Disease resistance protein signature 291 305 - -
Pral4711g00006 1145 PRINTS Disease resistance protein signature 221 236 - -
Pral4711g00006 1145 PRINTS Disease resistance protein signature 387 401 - -
Pral4711g00006 1145 PRINTS Disease resistance protein signature 858 874 - -
Pral4711g00006 1145 SUPERFAMILY L domain-like 504 899 - -
Pral4711g00006 1145 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 187 - -
Pral4711g00006 1145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 739 IPR044974 GO:0006952
Pral4711g00006 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 447 IPR027417 -
Pral4711g00006 1145 Pfam TIR domain 18 200 IPR000157 GO:0007165
Pral4711g00006 1145 Pfam NB-ARC domain 204 422 IPR002182 GO:0043531
Pral4711g00006 1145 Pfam Leucine Rich Repeat 628 647 IPR011713 -
Pral4711g00006 1145 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 161 IPR035897 -
Pral4711g00006 1145 Gene3D Ribonuclease Inhibitor 544 744 IPR032675 -
Pral4711g00006 1145 Gene3D Ribonuclease Inhibitor 745 927 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4711g00006 Pral-Chr4711 80684 85795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4711g00006 6 866 WRKY Transcription Factor Family AT4G12020 29.352 9.47e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4711g00006 - - pcin:129290874 849.351