Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4711g00004 ATGGCTTCATCTTCTTCCTCTGCTCCATCTTCTCAATCACCAAAAAAATATGATGTTTTTATTAGCTTCAGAGGTGAGGACAACCGCTTCAACTTCACAAGCCACCTTCATGAAGCTCTTCGCACAAACCAAATAGATACATACATCGACTATAGACTTGAGAAGGGAGATGAGGTATGGCCGTCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTACCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAGCTTGCAAAAATATTCGAGTGCTCCAAAAATCAAGATCACCTTGTTATGCCGGTGTTCCATAGAGTGGATCCTTCACATGTGAGGAAGCAGTCTAGGAGTTACGAGAGAGCATTTGAAGAACATGAGCGCAAAATAAACATCAACAATCAACAACTGCAAAAGTGGAGGGAGGCTCTTACTCGAGCTGCCAATTTGTCTGGTTGGCATTGTAGCTTCAATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAATTGTGTCATACAAAAGTTGGGCCTTAGGTATCAAAGTGAAGATTATCTAAAAGGCTTGATTGGAATTCACGAAAGAATGGCAGATGTAGAATCATTGTTGGACAAAGGTTCAAAAATTGGTGGTTGCCAATTTATTGGAATTTGGGGGATGGGCGGTTTGGGCAAAACAACTCTTGCAGAAGCATTGTTTAACAAATTGCATTTGCCATATGAAGGGTCTTGCTTTTTGAAAAACGTAAGGGAAGAATCAAAGAGACATGGAATAGATGCTTTGAGGGAAAAACTTGTTTGGAGGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATGTCCTTATACCGTCAGTAGGCTTAGTCGGAAAAAGGTTTTCATTGTGCTCGATGACATTGGTGATCTTACACATTTAGAAAAGTTAGTTGGAAGACATGAATTTGGATCAGGTAGTAAAATTTTGATAACAACCAGAGATAAGCAAACACTTGGCAATGAAGTGGATGATGTATATGTGCTTCGTGGTTTGAAACCTGATGAAGCTTTTGATCTATTCTCCATCAATGCCTTTAGAAATGGCCATGTTGACCCAGAGATAAGAGAGCTAGCAGAAGAAGTGACTAAATATGCAGGTGGAAATCCATTGGCTCTAAAGATTCTAGGCTCCACCTTGAGTGGCAAAAATCAAGAAGCATGGAAAAGCCAATTGGCAAAGCTTAAAAAATTACTTCGTCCAGAAGTCATTGATATCCTCAGATTGAGCTTTGAAGGACTTGATCAGGAAGAGAAAGATATTGTCTTGCACGTCGCATGTTTTTTCAATTATTATTATGATGCTGAGGATGTAAAAAAATTGTTAGATCCATGCGGTTATTCAACCGACATTGGATTGAGGAGACTTGAAGATAAAGCGCTTTTAGATATTGATGAAGGAAAAATATGTATGCACAGTCTGATAAAACAAATGGGTAAACAAATTGTCTGTGAAGAATCATTAAAATATCCTACATGGTGCAAAATATTTTGGATTTTCAGGAGAAGTTCTGAAATATTGAAGAAAAATATGGGAGGTATTGAAGGCATGATTATTAAACTTTCAGAAGTTGACGAGATGTGCGTAATTATTAAAGCATTTCGTTCAATGCCTAATGTGAAGCTTCTTAAGGTTTATGGAGATTTGAATGGACAGCTTAGGAACAAGTTAAATGCTTCTGGTCTGAAGTTTCTGTCAAGAAATCTCATGCTATTGGATTGGATGGGGTGCCCTTTAGCGTCCTTGCCAGCGACATTTAAGGCTGAAAGTCTTGTTCGATTGGATATGCCCTTCAGCAGTTTGACAAGACTTTGGGATGGAGTGCAGGATCTTGTGAGCTTAAGCAAAATTGAGCTTCATCGATCAGAAAACTTGATTGAACTCCCAGATTTTTCCAAGGCCACACGTCTTGAACATGTTTGTCTCGATTATTGCCCAAAATTGCGGAGTGTTCATCCATCTATTTTATCTCTCCGCAGCCTGCGTGATTTATCGCTAACTTATTGCAAGTCCCTTACCAGCCTTAAAAGCGATACCCATCTCCAATCTCTCATTGGGCTCGATGTAAGTGATTGCTCAAGTCTGGAGGAATTTTCAGTGACCTCAGGAAATGAAGAGCTCTATTTACAACTTTCAGGAACTGCCATCAGTGGTAAGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTCATTCATTAGCTATAGCCGAGTGCAGAAATGTGACAAGCATTCACAAATTGATTAAGCTGCGTGACCTTCGAAATCTTGATGCTGGAGGGTGTGATGAGCTAGCATCACGTCTCCTGTCCAAGTGTGATAAGATGGGTGCTTTGGAAAGACTAGGGCTTCCGTATTGCAATGAATTATCTGAACTTCCTAATGACATCGGGTTGCTGTCATCACTACGTGAGTTAAATCTCTCAGAGACTCATGTACAGACCTTGCCTTCAAGCATTAAACATCTTTCATGCCTGCATCGTCTTGAACTGGATGGATGTAAAAGGCTTCGTTGTCTACCGGAGCTCCCTCCCTCTCTCTTGCAATTAATTGCCACTGAGTGCGTATCCCTTGAGACCATACAATATTCACCTTTGACAAACGAAGGTGAAGAAGGAAAAGATAAGGCACCGCGCTTTTTATTCAGAAATTGCAAGAAGCTGAATCGACGGGCAATCAAAACTGCTGAGGCAAGAGTGCTACTTGAGATGAAGAAAGCCCCTTATGACTCTGCTATAGTGGAATATCCAGGAAAAAGAGTTCCAAAGTGGTTCATGCATAAGGATAAAGGGTCTTCGGTGTCTGTGAATCTCGGTTCGATTCCAAATTCTGAGGATGGGGGATTCCTTTTTTGCGTCGTCTTTTCTGAATTACCATTCGAGGGGGGAGGAGAAATTAATGCCGAATGGTTTATTGATGGTAAATATGCTTCCAGGGGCGCTAAAAACAGGTTTTACTTGCTTGGGCCAACGCTCTCAAAGCATGTTCATCTTTGGTATGATCCTGATTCACTTGGAAAACTAAAAAGGAAAATTGAAGAAAGGAAAAGAAATGGTCAGAGCGACATGGAGCTTAAAGTTAAATTCAAAGTTTGTTCGGATGATTCGGATGATGACAGAATAGTAGAGATCAAAAGGTGTGGGGTATGCCCAACATCTGCAGTTGAATATCAAGATGGTGACATTAAACAAATTCGATCGCCATGGCCTCCTCACCCTAGCTCTAATGCAATGGAAGCGGCCTCTCTCTCTCGAAAGCGCAAATGCACTATAACTTCATACGGATCAAAAGCCTGGCTCTAA 3354 0.4079 MASSSSSAPSSQSPKKYDVFISFRGEDNRFNFTSHLHEALRTNQIDTYIDYRLEKGDEVWPSLEKAIEDSTLYLVIFSENYASSTWCLKELAKIFECSKNQDHLVMPVFHRVDPSHVRKQSRSYERAFEEHERKININNQQLQKWREALTRAANLSGWHCSFNRDEAELIKEIVNCVIQKLGLRYQSEDYLKGLIGIHERMADVESLLDKGSKIGGCQFIGIWGMGGLGKTTLAEALFNKLHLPYEGSCFLKNVREESKRHGIDALREKLVWRLLGDKESHIGNAICPYTVSRLSRKKVFIVLDDIGDLTHLEKLVGRHEFGSGSKILITTRDKQTLGNEVDDVYVLRGLKPDEAFDLFSINAFRNGHVDPEIRELAEEVTKYAGGNPLALKILGSTLSGKNQEAWKSQLAKLKKLLRPEVIDILRLSFEGLDQEEKDIVLHVACFFNYYYDAEDVKKLLDPCGYSTDIGLRRLEDKALLDIDEGKICMHSLIKQMGKQIVCEESLKYPTWCKIFWIFRRSSEILKKNMGGIEGMIIKLSEVDEMCVIIKAFRSMPNVKLLKVYGDLNGQLRNKLNASGLKFLSRNLMLLDWMGCPLASLPATFKAESLVRLDMPFSSLTRLWDGVQDLVSLSKIELHRSENLIELPDFSKATRLEHVCLDYCPKLRSVHPSILSLRSLRDLSLTYCKSLTSLKSDTHLQSLIGLDVSDCSSLEEFSVTSGNEELYLQLSGTAISGKLRSSSGHRSKIHSLAIAECRNVTSIHKLIKLRDLRNLDAGGCDELASRLLSKCDKMGALERLGLPYCNELSELPNDIGLLSSLRELNLSETHVQTLPSSIKHLSCLHRLELDGCKRLRCLPELPPSLLQLIATECVSLETIQYSPLTNEGEEGKDKAPRFLFRNCKKLNRRAIKTAEARVLLEMKKAPYDSAIVEYPGKRVPKWFMHKDKGSSVSVNLGSIPNSEDGGFLFCVVFSELPFEGGGEINAEWFIDGKYASRGAKNRFYLLGPTLSKHVHLWYDPDSLGKLKRKIEERKRNGQSDMELKVKFKVCSDDSDDDRIVEIKRCGVCPTSAVEYQDGDIKQIRSPWPPHPSSNAMEAASLSRKRKCTITSYGSKAWL 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4711g00004 1117 PRINTS Disease resistance protein signature 219 234 - -
Pral4711g00004 1117 PRINTS Disease resistance protein signature 293 307 - -
Pral4711g00004 1117 PRINTS Disease resistance protein signature 384 398 - -
Pral4711g00004 1117 PRINTS Disease resistance protein signature 697 713 - -
Pral4711g00004 1117 SMART till_3 16 155 IPR000157 GO:0007165
Pral4711g00004 1117 Pfam TIR domain 16 194 IPR000157 GO:0007165
Pral4711g00004 1117 Coils Coil 128 148 - -
Pral4711g00004 1117 Pfam C-JID domain 933 1067 IPR045344 -
Pral4711g00004 1117 Pfam NB-ARC domain 203 415 IPR002182 GO:0043531
Pral4711g00004 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 441 IPR027417 -
Pral4711g00004 1117 Gene3D - 188 343 IPR027417 -
Pral4711g00004 1117 Gene3D - 14 187 IPR035897 -
Pral4711g00004 1117 Gene3D - 349 433 IPR042197 -
Pral4711g00004 1117 SUPERFAMILY L domain-like 489 867 - -
Pral4711g00004 1117 Pfam Leucine Rich Repeat 609 627 IPR011713 -
Pral4711g00004 1117 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral4711g00004 1117 Gene3D Ribonuclease Inhibitor 539 724 IPR032675 -
Pral4711g00004 1117 Gene3D Ribonuclease Inhibitor 725 906 IPR032675 -
Pral4711g00004 1117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 719 IPR044974 GO:0006952
Pral4711g00004 1117 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4711g00004 1117 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4711g00004 Pral-Chr4711 49924 54610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4711g00004 9 886 WRKY Transcription Factor Family AT4G12020 30.846 6.00e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4711g00004 - - pcin:129290874 999.964