Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4711g00003 ATGGCCTCATCTTCTTCCGCTGCTCCATCTTCTCAATCTCCAAAGAAATATGATGTTTTTATTAGTTTCAGAGGTGAGGACACCCGCTTCAACTTCACAAGCCACCTTCATGAAGCTCTTCGCAGAAAACAAATAGATACATACATCGACTATAGACTTGAGAAAGGAGATGATGTATGGCCGTCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTTCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACGTGGTGCTTGACGGAGCTTGCAAAAATATTGGAGTGCTCCAAAAATGATCAAGGTCTCCTTGTTATGCCAGTGTTCTATAGAGTAGATCCTTCATATGTGAGGAAGCAATGTGGGAGTTACCACAAAGCATTTGAAGAACATGAGCGCAAAAGCAGCATCAATAAGTATCAGCTGCAAAAGTGGAGGGAGGCTCTCACTCATGCCGCCAATTTATCTGGGTGGCATTGTAGCTTCGACAGGGATGAAGCTGAGCTAATTAAAGAAATAGTGAATCATGTCATACAAAAGTTGGGCCCTAGGTATCAAAGTGAAGATTATCTAAAAGGCTTGATTGGAATTCACAAAAGAATGGCAGATGTACAATCATTGTTGGACAAAGGTTCAAACAACGGTGGCTGCCAATTCATTGGAATTTGGGGCATGGGCGGTTTGGGCAAAACAACTCTTGCAAAAGCATTGTTTAAAAAATTGCATTTTACATATGAAGGGTCTTGCTTTTTGGCTAATGTAAGGGAAGAATCAAAGAAACATGGAATAGATGCTTTGAGGGAAAAAATTGTTTGGAGGTTATTAGGGGATAAAGAATCCCACATTGGCAATGCAATATATCCTTGTACCATAAGTAGGCTTGGTAGGAAAAAAGTTTTCATTGTGCTTGATGATGTTGATGATCTTGAGCAAATAGAAAATCTAGTTCGAGGACTTGAATTTGGATCAGGTAGTAAAATTTTGATAACAACCAGAGATAAGCAAATACTTGGTAATGAAGTGGATGATATATATGTGCTTCAGTGTTTGAATCCTGATGAAGCTTTTCAACTTTTCGCCTTGAATGCCTTCAAAAAAGGCTATGGTGACCCAAAGATAAGGGTGCTAGCAGAAAAAGTGACTGAATATGTAGGTGGAAATCCATTGGCCCTAAAGGTTTTAGGCTCCTTCTTGCATGGCAAAAATCAAGAAGCATGGGAAAGCCAACTGGGAAGTATTGAAGGCATGATTATGAACCTTTCAGAAGTTGAAGAGATGGATGTAATTATTAAAGCCTTTCGTTCAATGCCCAATCTGAAATTTCTTAGGTTTTATGGAAATTTGAATGGTCAGCTTAGCAACAAGTTAAATGCTTCTAGTATGAAGCTTTTGCCAAGAAATCTCATGCTATTAGATTGGGTGGGATGCCCTTTAAAGTCCTTGCCAACAACATTCAATGGAGAAAATCTTGTTGAAATAAAAATGCCCAACAGCAATTTGACAAAACTCTGGGATGGAGAGCAGAATCTTGTGAATTTAACCAAAATTGATCTTCATGAATCAAAAGACTTGACTGAGCTCCCAAATTTTTCCAAGGCCATACATCTTGCAGAAGTTTATCTTCAGGGTTGTTCAAAATTGCTGAATGTTCATCCCTCTATTTTATCTCTCCATAGCCTTTGTGGATTATTGCTAAGTGGTTGCAAAGCCCTTACCAACCTTACGAGCAACACCCATCTCAAATCACTAAGTATGCTCGACTTGACGGGATGCTCAGGACTACGCGAATTTTCAGTGACCTCAGAATATAATTTGTTTGAATTGATGCTTTGTGGAACAGCCATCAATGGTGAGTTGTCCTCATCAAGCGGATGTCTCAGCAAAATTTATTTTTTGGACCTAGAAAGATGCGAAGGGGTGACAAGTCTTCACAAATTGGTTGACAAGCACACCCTCCAACGCCTTCATGCTGATTATTGTAATAAGCTAGCATCAAATGGACGTTCCATATTTGATGAGATGCGTGCTTTGGAAGCTCTAGTGCTGAGGGGTTGTAGTGAATTATTTGAAGTTCCTGACAACATCAGCTTGTTGTCGTCATTAAGTCAGTTAGATCTCTCGAGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGCAATGTCTCACCTTAGATGGATGCAAAAGGCTTCTGTCCCTACCACAACTCCCTCCCTCTATCTGTACACTGGAAGCCAATGGCTGCTGGTCCCTTGAGACTTTACATTCACCTTTAATGAGTGAAGAGATAGAAGGAAAAAATTATTTTTATGATAACTTCAGTTTCAGAAGTTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCAAAGTGCTACTTTACATGAATAATAACAAAGACATTCATTACCGGGCTCAAATGGAATTTCCGGGAGGAAGAGTTGCGGAGTGGGTCATGTATAGGACTACACAGTCTTTGGTGACTGTGGATCTCAGCTCGATTCCACAACCTTGGGATGGCGCCTTTATTTGTTGTGCCGTGATTTATGGCTCACCATCGCGGACTACAATTGGTGCCAAATTGTTTATTGATGGACAATATGCTTACATGTCTCCAGGCGAGTCTTTTCATGTGTCTCTGTTGTCACATGTTTGTCTTTGGTACGATGCAAAGTCATGGAAAAAGGTACAAAGGACAATTGAAGAAAAGAAAAGAGAAGCTCAAAGCAACACTACCTATCATCCATTATTGCTTCAATTTGAATTCACAGCCCTTTCGCCTTATGATGATGAAACAACAGTAGTGATCGAAGAGTGTGGGGTGTGCCCGACATCTGCCGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCATTATTGCATCCGCATCGTAGCTCTAATGCAACGCAATCGGCCTCTCAAAAGTGCAATCGGCCTGCAAAGAAGCAGTCTGGAAATATAATCACTAGAAATTAA 3003 0.4023 MASSSSAAPSSQSPKKYDVFISFRGEDTRFNFTSHLHEALRRKQIDTYIDYRLEKGDDVWPSLEKAIEDSTLFLVIFSENYASSTWCLTELAKILECSKNDQGLLVMPVFYRVDPSYVRKQCGSYHKAFEEHERKSSINKYQLQKWREALTHAANLSGWHCSFDRDEAELIKEIVNHVIQKLGPRYQSEDYLKGLIGIHKRMADVQSLLDKGSNNGGCQFIGIWGMGGLGKTTLAKALFKKLHFTYEGSCFLANVREESKKHGIDALREKIVWRLLGDKESHIGNAIYPCTISRLGRKKVFIVLDDVDDLEQIENLVRGLEFGSGSKILITTRDKQILGNEVDDIYVLQCLNPDEAFQLFALNAFKKGYGDPKIRVLAEKVTEYVGGNPLALKVLGSFLHGKNQEAWESQLGSIEGMIMNLSEVEEMDVIIKAFRSMPNLKFLRFYGNLNGQLSNKLNASSMKLLPRNLMLLDWVGCPLKSLPTTFNGENLVEIKMPNSNLTKLWDGEQNLVNLTKIDLHESKDLTELPNFSKAIHLAEVYLQGCSKLLNVHPSILSLHSLCGLLLSGCKALTNLTSNTHLKSLSMLDLTGCSGLREFSVTSEYNLFELMLCGTAINGELSSSSGCLSKIYFLDLERCEGVTSLHKLVDKHTLQRLHADYCNKLASNGRSIFDEMRALEALVLRGCSELFEVPDNISLLSSLSQLDLSRSNIETLPLSIKHLSSLQCLTLDGCKRLLSLPQLPPSICTLEANGCWSLETLHSPLMSEEIEGKNYFYDNFSFRSCMKLDGQSIKAVEAKVLLYMNNNKDIHYRAQMEFPGGRVAEWVMYRTTQSLVTVDLSSIPQPWDGAFICCAVIYGSPSRTTIGAKLFIDGQYAYMSPGESFHVSLLSHVCLWYDAKSWKKVQRTIEEKKREAQSNTTYHPLLLQFEFTALSPYDDETTVVIEECGVCPTSAVEYQNYIKQIQLALLHPHRSSNATQSASQKCNRPAKKQSGNIITRN 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4711g00003 1000 MobiDBLite consensus disorder prediction 977 1000 - -
Pral4711g00003 1000 Gene3D - 14 188 IPR035897 -
Pral4711g00003 1000 Gene3D - 189 344 IPR027417 -
Pral4711g00003 1000 Pfam NB-ARC domain 203 433 IPR002182 GO:0043531
Pral4711g00003 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 418 IPR027417 -
Pral4711g00003 1000 Gene3D - 350 430 IPR042197 -
Pral4711g00003 1000 Gene3D Ribonuclease Inhibitor 654 770 IPR032675 -
Pral4711g00003 1000 SMART till_3 16 156 IPR000157 GO:0007165
Pral4711g00003 1000 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 159 IPR035897 -
Pral4711g00003 1000 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pral4711g00003 1000 SUPERFAMILY L domain-like 428 760 - -
Pral4711g00003 1000 PRINTS Disease resistance protein signature 385 399 - -
Pral4711g00003 1000 PRINTS Disease resistance protein signature 220 235 - -
Pral4711g00003 1000 PRINTS Disease resistance protein signature 579 595 - -
Pral4711g00003 1000 PRINTS Disease resistance protein signature 294 308 - -
Pral4711g00003 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 428 610 IPR044974 GO:0006952
Pral4711g00003 1000 Pfam TIR domain 16 196 IPR000157 GO:0007165
Pral4711g00003 1000 Pfam Leucine Rich Repeat 490 509 IPR011713 -
Pral4711g00003 1000 Gene3D Ribonuclease Inhibitor 470 653 IPR032675 -
Pral4711g00003 1000 ProSiteProfiles TIR domain profile. 15 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4711g00003 Pral-Chr4711 27009 31616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4711g00003 413 771 WRKY Transcription Factor Family AT4G12020 32.880 6.66e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4711g00003 - - pcin:129290874 659.062