Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4707g00049 ATGGTGCCCATTGGAGCCTCCCCTCTTAATAATTCACTCCTAGCTCACTCTCCCCGGCAGAAGCAAAGGCCTCGTAAATTTGACCTCTCTGCCTCTCTCTTCTCTGATCTTTGTCGCAAGCTAGATTGGTCGCTCTCTTTCACCGACCCAGCAAGGCGGCAATTCTCAGGCAATAAATATGAAATATTCTTGAGTTTTAGTAGAGAGGAAGACACTCAAGTATCTTTGGCTTCTCGTCTCTATTCATCCTTAAGGGAAGCAAGAATTTCTGCTCCTGATGATGATATCTCAGTTGAACTGTTGCCAAGCATTATTGAAAGTTCCGAAATTTCCATCATCATCTTTTCTATACAATATGTTAGTTCAAGAAGATGCCTCGAGGAACTCACAAAAGTCATGGAGTTCCGCAGAACACGAGATCATGTTATTCTTCCCATATTTTATGGTGTGGATCCGTCTACGCTTCGTAATCTAGAATCTGGTCCTGGACAAGAATTCCGAGAACATATAAAAAGAATTTCACCCGCTGAAAATGAAGTGTTAAGGTGGATGACAGCTGTCAGGGAAGCTGGAGGCAATTATGGGTTCGTTGTGTCAGATGATTTCGACTCCAAGAATGAAAGTGAGGTTATTCAGAATATTATCAAGCGTGTTCGTCATATATTGGACACAAAAGACCCGTTTTCCAGAGATGGCCTGGTTGGGGTGAGTTCACAAGTACAAGAAGTGATTAAAATGCTTCAAAAGCATCAATCAGAAGATGTTGTCTCCATAGGGATATGGGGAATGGGGGGTAGTGGCAAAACAACACTTGCCAGACTCGTTTTTGAGCACATTCAGTACGAATTCAAGAGTAGATGTTTTCTTTCAAATGTCAGGAAAGAATGGAAGAGGGAAGGCCAAGCTTATTTACAGAAAAAACTTCTTTCAGTAATATGTGAAGCAACAGATGTGAAAATAGATAGCATTGAATCAACAAGCCTCGAGTTGAAGAAAAGACTTTGTCATAAGAAAGTACTTCTTGTGCTTGATGATGTTATTCACTTGGAGCAGCTACATGCTTTATGCGGAAGTAGCGAATGGTTTGGTGAAGGGAGTAGAATCATCATTACAACTAGAGATAAACATCTACTTGAAGCCTTTCAAGAGGACCGTGTATATACCATGAAACTCCTGGGCGATCATGAGTCTCTTGACCTTTTCTGTAGAAAAGCATTTAAACAAGCAAGTCCTGAGGGAAAATTCATCGAACTATCCACAAGAGTGGTTGCTTATGCTGAGGGACTGCCACTAGCTCTTGAAGTTCTTGGCTCTATTTTTTATGGGCAGTCATGTGGGCTGTGGGAGTCGATGTTGATGAAACTAAGCATAATTCCCCCTGATGATATATACCAAAAACTAAAGCCTAGCTTTGACTCTTTGGATGGTAATGGAAAAGACATATTTCTAAATTTAGTTTTTTTTTATATTGGGGAGAAGATTGACGATGCGATACAAAATCTGGAAGGCCGTGGTTATAATGCTAGAACTGGGATAAGAGACCTACAGTTTCGAAGCCTTGTAACCATTGATGAGGACAGACTTAGAATGCACAACTCATTGCAGCTCATGGGAAGACAAATAATAAGTCGAAGTCCGCAAAACGAGCTTCCAAAGCAAGGTGATAGGTACGAGGTATTCTTAAGTTTTAGAGGTGAAGACACTCGGGCAACTTTTACTTCACATCTCTATAAGGATCTAGATAAAGCTGGCATTATTGTTTTCAAAGATGATATTGAGCTTCCCAGAGGAAATCATATCAAAACGGAACTACTACAAGCAATTAGAAGTTCAAAAATTGCAATTATCATCTTTTCTAAGGAATACGCTGGATCTAAATGGTGTTTGGAGGAATTGTCAATAATCATGAAGCTTCATAAATCAAATGGTCAGGTGGTTCTGCCTGTGTTTTACCACATGGATCCATCAGATGTTCGTCATCAAACTTCAGGTTTTGGAGAAGCATTTCAAGGTCTTACAGAAAAAATTTCACCACCAAAATTTGAGGTTCACAAGTGGGCCACAGCACTTCGTGAGGCTGGGGAAATTGCAGGGATTGTCGTACCTGGTTACAGGGACGAGGGTAAAATTGTGACAGATCTTGTTGAGGAGGTTTGTTGTCTATTGAACAAGAAAGACATGGATGTCGCTGAGCACCCAGTAGGAGTGGATGATCGTGTGCAAGAAGTGATCACTATGCTTCAAAACTATCAATCTAAAGATGTTATCATGGTAGGGATATGGGGAATGGGAGGTGTGGGCAAAACAACTATTGCTAAAGCTGTTTATAATGCAATTGGTCATAATGAAATTGGTCGAACTTTTGAGAGTAGGAGTTACCTTTCAAATATCAGAAAATGTTGGGGTCGAGAAGAGGGAAAAGTGAGCTTACAGAAGCAACTTCTTTCTAACATATGTATGCCAACAAAAACAGAGATAAATAATACTGAATCAGGAAAAATCATATTGAGGGACAGACTTTGCCATAAAAAAGCACTGGTTGTGCTTGATGATGTGGATAAGCCGGCCCAACTAAATGATTTAGTTGGAAGTCCTTGTTGGTTTGGTCGAGGAAGCATAATAATCATCACAACTAGAAATCAATGTCTACTCCGTGAAAGAGACTGTGGTGTTTATACAATGAAAAATTTGGATGAAGGAGAATCTATTGAGCTTTTTAGTTGGTACGCATTTAAACAAACAAGTCCTAAAAAAGATTTCAATGAACTTTCAAGAGACATAGTTGCATACTCTGGGGGACTTCCATTAGCTCTTAAAGTCCTTGGCCGCCTTTTATTTGGTGGAGAAGCAAAGGAATGGAAGAGTGTATTGGAAAAGCTTAAAAAATCTCCCTTTAAAGAGATACAGGACGAGCTAAAAACAAGCTTTGATGGTTTAAGTGATGACTTTAATGAGAAAGACATATTCCTTGATATATGTTGCTTCTTTATTGGGATGGATAGAAAAGATGTGACACGGATATTAAAAGGTTGTGGATTTGCTGCTCACATTGGAATCAAAACCCTTGAGGAGCAAAGCCTTGTAACCATCCAAGAGGAGAACAAGCTTGGTATGCATGATTTGCTGCGGGACATGGGAAGAGGAATAATTCGTGAACGGTCTCAATACCTGGGGAAGAGAAGTCGGTTATGGTTTCACGAGGATGCACGAACTGTATTATTAAGACAGAAGGGAACAAAGGATATTGAAGGACTATCTATGAAGTCGTCAAAAGGTGGAGAAGAGCGTTTTGAAACAAAAGCATTTAAGAAGATGGAGAAACTTAGATTACTTCATCTTGAAAATATACAACTTGGAGGAGACTACAAGTACATCAATGGAGCTCTTAGATGGCTTTGCTGGCATGGCTTTCCTGTAGAGCACATTCCTAAAAAATTTTATCAGGAGAAATTAGTTGTTATGGAATTAAAATACAGCAACCTTAGACAAGTGTGGAGACAACCCCAGTTATTGGTGAAGCTAAAAATCCTCAACCTCAGCCACTCTCATTACTTGGCGGACACTCCTGATTTTTCAAAACTACCAAATCTTAAAAAGTTGATCTTCAAAGATTGTCCAAATTTGTCCAAGATAGATGATTCTATTGAGCTTCTTGATAAACTTCTTCTACTAGATTTGGAGGATTGTATTGGCCTTCGTAGTCTCACAAGTATGATTTATAGATTAAAAAGCTTAAAAACTCTCATTCTTTCTGGTTGTATTAATATTGAAAACCTTGAGGAGATCAAAGAGCAAATGAAACATTTGACAACTCTACTTCTTCCTACAAGAATTCTTCCGGAAGATGGATTGGAGATTCCTGATTCGTTCTGTGCCACAAATTGTATGGATATCTCAACTCTTAAAAACTCCTTGGCACATCATGTCATTCAAATTGGAAACAATTCTCAAGTCTTTTGTTCACTTTCAAAGAGTGTTTTACAGGGATTGAATTTTACAAAGTATGGTGATGGCTGTATTCTCCCTGATGACAATGATCCCTATTGGCGAACATTCAAAGGTGAAGGAGATTTTATGGAGCTTTCCACATCTGAAGCTACAAATTTAATTGGCACTGAACACAAACGGGAGGAGGAAGAAGAGGAGGCACATCAATCCGTTAGACCTAGAAAAGCAAAGAAGATGTGA 4188 0.3928 MVPIGASPLNNSLLAHSPRQKQRPRKFDLSASLFSDLCRKLDWSLSFTDPARRQFSGNKYEIFLSFSREEDTQVSLASRLYSSLREARISAPDDDISVELLPSIIESSEISIIIFSIQYVSSRRCLEELTKVMEFRRTRDHVILPIFYGVDPSTLRNLESGPGQEFREHIKRISPAENEVLRWMTAVREAGGNYGFVVSDDFDSKNESEVIQNIIKRVRHILDTKDPFSRDGLVGVSSQVQEVIKMLQKHQSEDVVSIGIWGMGGSGKTTLARLVFEHIQYEFKSRCFLSNVRKEWKREGQAYLQKKLLSVICEATDVKIDSIESTSLELKKRLCHKKVLLVLDDVIHLEQLHALCGSSEWFGEGSRIIITTRDKHLLEAFQEDRVYTMKLLGDHESLDLFCRKAFKQASPEGKFIELSTRVVAYAEGLPLALEVLGSIFYGQSCGLWESMLMKLSIIPPDDIYQKLKPSFDSLDGNGKDIFLNLVFFYIGEKIDDAIQNLEGRGYNARTGIRDLQFRSLVTIDEDRLRMHNSLQLMGRQIISRSPQNELPKQGDRYEVFLSFRGEDTRATFTSHLYKDLDKAGIIVFKDDIELPRGNHIKTELLQAIRSSKIAIIIFSKEYAGSKWCLEELSIIMKLHKSNGQVVLPVFYHMDPSDVRHQTSGFGEAFQGLTEKISPPKFEVHKWATALREAGEIAGIVVPGYRDEGKIVTDLVEEVCCLLNKKDMDVAEHPVGVDDRVQEVITMLQNYQSKDVIMVGIWGMGGVGKTTIAKAVYNAIGHNEIGRTFESRSYLSNIRKCWGREEGKVSLQKQLLSNICMPTKTEINNTESGKIILRDRLCHKKALVVLDDVDKPAQLNDLVGSPCWFGRGSIIIITTRNQCLLRERDCGVYTMKNLDEGESIELFSWYAFKQTSPKKDFNELSRDIVAYSGGLPLALKVLGRLLFGGEAKEWKSVLEKLKKSPFKEIQDELKTSFDGLSDDFNEKDIFLDICCFFIGMDRKDVTRILKGCGFAAHIGIKTLEEQSLVTIQEENKLGMHDLLRDMGRGIIRERSQYLGKRSRLWFHEDARTVLLRQKGTKDIEGLSMKSSKGGEERFETKAFKKMEKLRLLHLENIQLGGDYKYINGALRWLCWHGFPVEHIPKKFYQEKLVVMELKYSNLRQVWRQPQLLVKLKILNLSHSHYLADTPDFSKLPNLKKLIFKDCPNLSKIDDSIELLDKLLLLDLEDCIGLRSLTSMIYRLKSLKTLILSGCINIENLEEIKEQMKHLTTLLLPTRILPEDGLEIPDSFCATNCMDISTLKNSLAHHVIQIGNNSQVFCSLSKSVLQGLNFTKYGDGCILPDDNDPYWRTFKGEGDFMELSTSEATNLIGTEHKREEEEEEAHQSVRPRKAKKM 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4707g00049 1395 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 557 1282 IPR044974 GO:0006952
Pral4707g00049 1395 Gene3D - 42 188 IPR035897 -
Pral4707g00049 1395 ProSiteProfiles TIR domain profile. 555 718 IPR000157 GO:0007165
Pral4707g00049 1395 MobiDBLite consensus disorder prediction 1367 1395 - -
Pral4707g00049 1395 SUPERFAMILY Toll/Interleukin receptor TIR domain 54 190 IPR035897 -
Pral4707g00049 1395 Gene3D - 896 980 IPR042197 -
Pral4707g00049 1395 Gene3D - 392 475 IPR042197 -
Pral4707g00049 1395 Gene3D - 554 721 IPR035897 -
Pral4707g00049 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 729 992 IPR027417 -
Pral4707g00049 1395 MobiDBLite consensus disorder prediction 1370 1388 - -
Pral4707g00049 1395 SUPERFAMILY L domain-like 1098 1315 - -
Pral4707g00049 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 485 IPR027417 -
Pral4707g00049 1395 SUPERFAMILY "Winged helix" DNA-binding domain 967 1073 IPR036390 -
Pral4707g00049 1395 MobiDBLite consensus disorder prediction 1 21 - -
Pral4707g00049 1395 Gene3D Ribonuclease Inhibitor 1090 1279 IPR032675 -
Pral4707g00049 1395 FunFam Disease resistance protein (TIR-NBS-LRR class) 553 724 - -
Pral4707g00049 1395 Pfam TIR domain 59 221 IPR000157 GO:0007165
Pral4707g00049 1395 Pfam TIR domain 557 720 IPR000157 GO:0007165
Pral4707g00049 1395 Pfam NB-ARC domain 737 972 IPR002182 GO:0043531
Pral4707g00049 1395 Pfam NB-ARC domain 238 440 IPR002182 GO:0043531
Pral4707g00049 1395 SUPERFAMILY Toll/Interleukin receptor TIR domain 552 698 IPR035897 -
Pral4707g00049 1395 Gene3D - 722 892 IPR027417 -
Pral4707g00049 1395 Gene3D - 195 387 IPR027417 -
Pral4707g00049 1395 PRINTS Disease resistance protein signature 931 945 - -
Pral4707g00049 1395 PRINTS Disease resistance protein signature 757 772 - -
Pral4707g00049 1395 PRINTS Disease resistance protein signature 839 853 - -
Pral4707g00049 1395 PRINTS Disease resistance protein signature 1240 1256 - -
Pral4707g00049 1395 ProSiteProfiles TIR domain profile. 58 222 IPR000157 GO:0007165
Pral4707g00049 1395 SMART till_3 556 696 IPR000157 GO:0007165
Pral4707g00049 1395 SMART till_3 59 193 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4707g00049 Pral-Chr4707 973957 982557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4707g00049 234 544 WRKY Transcription Factor Family AT5G45050 37.700 1.16e-49 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4707g00049 - - pcin:129287786 1342.41